4jbd: Difference between revisions
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== | ==Crystal structure of Pput_1285, a putative hydroxyproline epimerase from Pseudomonas putida f1 (target EFI-506500), open form, space group I2, bound citrate== | ||
[[4jbd]] is a 1 chain structure with sequence from [ | <StructureSection load='4jbd' size='340' side='right'caption='[[4jbd]], [[Resolution|resolution]] 1.30Å' scene=''> | ||
[[ | == Structural highlights == | ||
[[ | <table><tr><td colspan='2'>[[4jbd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida_F1 Pseudomonas putida F1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JBD FirstGlance]. <br> | ||
[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3Å</td></tr> | ||
[[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr> | ||
[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jbd OCA], [https://pdbe.org/4jbd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jbd RCSB], [https://www.ebi.ac.uk/pdbsum/4jbd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jbd ProSAT]</span></td></tr> | ||
[[Category: | </table> | ||
[[Category: | == Function == | ||
[[Category: | [https://www.uniprot.org/uniprot/4HYPE_PSEP1 4HYPE_PSEP1] Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha-ketoglutarate. Can also catalyze the epimerization of trans-3-hydroxy-L-proline (t3LHyp) to cis-3-hydroxy-D-proline (c3DHyp), albeit with 200-fold lower efficiency.<ref>PMID:24980702</ref> | ||
[[Category: | |||
[[Category: | ==See Also== | ||
[[Category: | *[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]] | ||
[[Category: | == References == | ||
[[Category: | <references/> | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Pseudomonas putida F1]] | ||
[[Category: | [[Category: Al Obaidi NF]] | ||
[[Category: | [[Category: Almo SC]] | ||
[[Category: | [[Category: Bhosle R]] | ||
[[Category: | [[Category: Chowdhury S]] | ||
[[Category: | [[Category: Evans B]] | ||
[[Category: | [[Category: Gerlt JA]] | ||
[[Category: | [[Category: Hammonds J]] | ||
[[Category: | [[Category: Hillerich B]] | ||
[[Category: | [[Category: Imker HJ]] | ||
[[Category: Love J]] | |||
[[Category: Morisco LL]] | |||
[[Category: Scott Glenn A]] | |||
[[Category: Seidel RD]] | |||
[[Category: Sojitra S]] | |||
[[Category: Stead M]] | |||
[[Category: Toro R]] | |||
[[Category: Vetting MW]] | |||
[[Category: Washington E]] | |||
[[Category: Wasserman SR]] | |||
Latest revision as of 15:39, 20 September 2023
Crystal structure of Pput_1285, a putative hydroxyproline epimerase from Pseudomonas putida f1 (target EFI-506500), open form, space group I2, bound citrate
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