3ikh: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3ikh|  PDB=3ikh  |  SCENE=  }}
===Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae===


==About this Structure==
==Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae==
[[3ikh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_mgh_78578 Klebsiella pneumoniae subsp. pneumoniae mgh 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IKH OCA].  
<StructureSection load='3ikh' size='340' side='right'caption='[[3ikh]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
[[Category: Klebsiella pneumoniae subsp. pneumoniae mgh 78578]]
== Structural highlights ==
[[Category: Ribokinase]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IKH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IKH FirstGlance]. <br>
[[Category: Burley, S K.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Satyanarayana, L.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ikh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ikh OCA], [https://pdbe.org/3ikh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ikh RCSB], [https://www.ebi.ac.uk/pdbsum/3ikh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ikh ProSAT]</span></td></tr>
[[Category: Swaminathan, S.]]
</table>
[[Category: 11206l1]]
== Evolutionary Conservation ==
[[Category: Atp]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: D-ribose metabolic process]]
Check<jmol>
[[Category: Kinase]]
  <jmolCheckbox>
[[Category: New york sgx research center for structural genomic]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ik/3ikh_consurf.spt"</scriptWhenChecked>
[[Category: Nysgxrc]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Pfkb family]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Protein structure initiative]]
  </jmolCheckbox>
[[Category: Psi-ii]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ikh ConSurf].
[[Category: Ribokinase]]
<div style="clear:both"></div>
[[Category: Ribose]]
__TOC__
[[Category: Sad]]
</StructureSection>
[[Category: Structural genomic]]
[[Category: Large Structures]]
[[Category: Transferase]]
[[Category: Burley SK]]
[[Category: Satyanarayana L]]
[[Category: Swaminathan S]]

Latest revision as of 06:20, 27 November 2024

Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae

3ikh, resolution 1.88Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA