3ib5: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3ib5|  PDB=3ib5  |  SCENE=  }}
===Crystal structure of Sex pheromone precursor (YP_536235.1) from LACTOBACILLUS SALIVARIUS SUBSP. SALIVARIUS UCC118 at 1.35 A resolution===


==About this Structure==
==Crystal structure of Sex pheromone precursor (YP_536235.1) from LACTOBACILLUS SALIVARIUS SUBSP. SALIVARIUS UCC118 at 1.35 A resolution==
[[3ib5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_salivarius_ucc118 Lactobacillus salivarius ucc118]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IB5 OCA].  
<StructureSection load='3ib5' size='340' side='right'caption='[[3ib5]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
[[Category: Lactobacillus salivarius ucc118]]
== Structural highlights ==
[[Category: JCSG, Joint Center for Structural Genomics.]]
<table><tr><td colspan='2'>[[3ib5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ligilactobacillus_salivarius_UCC118 Ligilactobacillus salivarius UCC118]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IB5 FirstGlance]. <br>
[[Category: Cams sex pheromone cam373 precursor]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
[[Category: Hormone]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
[[Category: Jcsg]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ib5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ib5 OCA], [https://pdbe.org/3ib5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ib5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ib5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ib5 ProSAT], [https://www.topsan.org/Proteins/JCSG/3ib5 TOPSAN]</span></td></tr>
[[Category: Joint center for structural genomic]]
</table>
[[Category: Lipoprotein]]
== Function ==
[[Category: Protein structure initiative]]
[https://www.uniprot.org/uniprot/Q1WSH7_LIGS1 Q1WSH7_LIGS1]  
[[Category: Psi-2]]
== Evolutionary Conservation ==
[[Category: Sex pheromone precursor]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Structural genomic]]
Check<jmol>
[[Category: Yp_536235 1]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/3ib5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ib5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Ligilactobacillus salivarius UCC118]]