3i8b: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3i8b|  PDB=3i8b  |  SCENE=  }}
===The crystal structure of xylulose kinase from Bifidobacterium adolescentis===


==About this Structure==
==The crystal structure of xylulose kinase from Bifidobacterium adolescentis==
[[3i8b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_adolescentis_atcc_15703 Bifidobacterium adolescentis atcc 15703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I8B OCA].  
<StructureSection load='3i8b' size='340' side='right'caption='[[3i8b]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
[[Category: Bifidobacterium adolescentis atcc 15703]]
== Structural highlights ==
[[Category: Burley, S K.]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I8B FirstGlance]. <br>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
[[Category: Swaminathan, S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Zhang, Z.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i8b OCA], [https://pdbe.org/3i8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i8b RCSB], [https://www.ebi.ac.uk/pdbsum/3i8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i8b ProSAT]</span></td></tr>
[[Category: 11200j]]
</table>
[[Category: Bifidobacterium adolescenti]]
== Evolutionary Conservation ==
[[Category: Kinase]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: New york sgx research center for structural genomic]]
Check<jmol>
[[Category: Nysgxrc]]
  <jmolCheckbox>
[[Category: Protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i8/3i8b_consurf.spt"</scriptWhenChecked>
[[Category: Psi-2]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Strain atcc 15703 / dsm 20083]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Structural genomic]]
  </jmolCheckbox>
[[Category: Transferase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i8b ConSurf].
[[Category: Xylulose kinase]]
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Burley SK]]
[[Category: Swaminathan S]]
[[Category: Zhang Z]]

Latest revision as of 01:56, 21 November 2024

The crystal structure of xylulose kinase from Bifidobacterium adolescentis

3i8b, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA