3iyk: Difference between revisions

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{{STRUCTURE_3iyk|  PDB=3iyk  |  SCENE=  }}
===Bluetongue virus structure reveals a sialic acid binding domain, amphipathic helices and a central coiled coil in the outer capsid proteins===
{{ABSTRACT_PUBMED_20332209}}


==About this Structure==
==Bluetongue virus structure reveals a sialic acid binding domain, amphipathic helices and a central coiled coil in the outer capsid proteins==
[[3iyk]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/Bluetongue_virus Bluetongue virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYK OCA].  
<SX load='3iyk' size='340' side='right' viewer='molstar' caption='[[3iyk]], [[Resolution|resolution]] 7.00&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3iyk]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Bluetongue_virus Bluetongue virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IYK FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 7&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MNA:2-O-METHYL-5-N-ACETYL-ALPHA-D-+NEURAMINIC+ACID'>MNA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iyk OCA], [https://pdbe.org/3iyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iyk RCSB], [https://www.ebi.ac.uk/pdbsum/3iyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iyk ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/C5IWW1_9VIRU C5IWW1_9VIRU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iyk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iyk ConSurf].
<div style="clear:both"></div>


==Reference==
==See Also==
<ref group="xtra">PMID:020332209</ref><references group="xtra"/><references/>
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
__TOC__
</SX>
[[Category: Bluetongue virus]]
[[Category: Bluetongue virus]]
[[Category: Bhattacharya, B.]]
[[Category: Large Structures]]
[[Category: Boyce, M.]]
[[Category: Bhattacharya B]]
[[Category: Roy, P.]]
[[Category: Boyce M]]
[[Category: Schein, S.]]
[[Category: Roy P]]
[[Category: Zhang, X.]]
[[Category: Schein S]]
[[Category: Zhou, Z H.]]
[[Category: Zhang X]]
[[Category: Icosahedral virus]]
[[Category: Zhou ZH]]
[[Category: Virus]]