4jo5: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
The | ==CBM3a-L domain with flanking linkers from scaffoldin cipA of cellulosome of Clostridium thermocellum== | ||
<StructureSection load='4jo5' size='340' side='right'caption='[[4jo5]], [[Resolution|resolution]] 1.98Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[4jo5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_YS Acetivibrio thermocellus YS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JO5 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1MZ:1-METHYLIMIDAZOLE'>1MZ</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jo5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jo5 OCA], [https://pdbe.org/4jo5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jo5 RCSB], [https://www.ebi.ac.uk/pdbsum/4jo5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jo5 ProSAT]</span></td></tr> | |||
</table> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
The cellulosome of the cellulolytic bacterium Clostridium thermocellum has a structural multi-modular protein called CipA (cellulosome-integrating protein A) that includes nine enzyme-binding cohesin modules and a family 3 cellulose-binding module (CBM3a). In the CipA protein, the CBM3a module is located between the second and third cohesin modules and is connected to them via proline/threonine-rich linkers. The structure of CBM3a with portions of the C- and N-terminal flanking linker regions, CBM3a-L, has been determined to a resolution of 1.98 A. The structure is a beta-sandwich with a structural Ca(2+) ion. The structure is consistent with the previously determined CipA CBM structure; however, the structured linker regions provide a deeper insight into the overall cellulosome structure and assembly. | |||
Structure of a family 3a carbohydrate-binding module from the cellulosomal scaffoldin CipA of Clostridium thermocellum with flanking linkers: implications for cellulosome structure.,Yaniv O, Morag E, Borovok I, Bayer EA, Lamed R, Frolow F, Shimon LJ Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jul;69(Pt 7):733-7. doi:, 10.1107/S174430911301614X. Epub 2013 Jun 27. PMID:23832198<ref>PMID:23832198</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 4jo5" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Acetivibrio thermocellus YS]] | |||
[[Category: Large Structures]] | |||
[[Category: Bayer EA]] | |||
[[Category: Frolow F]] | |||
[[Category: Lamed R]] | |||
[[Category: Morag E]] | |||
[[Category: Shimon LJW]] | |||
[[Category: Yaniv O]] | |||
Latest revision as of 15:46, 20 September 2023
CBM3a-L domain with flanking linkers from scaffoldin cipA of cellulosome of Clostridium thermocellum
| ||||||||||||
