3k4o: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
m Protected "3k4o" [edit=sysop:move=sysop]
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3k4o|  PDB=3k4o  |  SCENE=  }}
===Crystal Structure of Isopentenyl Phosphate Kinase from Methanocaldococcus jannaschii===
{{ABSTRACT_PUBMED_20392112}}


==About this Structure==
==Crystal Structure of Isopentenyl Phosphate Kinase from Methanocaldococcus jannaschii==
[[3k4o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4O OCA].  
<StructureSection load='3k4o' size='340' side='right'caption='[[3k4o]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[3k4o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K4O FirstGlance]. <br>
<ref group="xtra">PMID:020392112</ref><references group="xtra"/><references/>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
[[Category: Methanocaldococcus jannaschii]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Dellas, N.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k4o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k4o OCA], [https://pdbe.org/3k4o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k4o RCSB], [https://www.ebi.ac.uk/pdbsum/3k4o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k4o ProSAT]</span></td></tr>
[[Category: Noel, J P.]]
</table>
[[Category: Archaea]]
== Function ==
[[Category: Atp-binding]]
[https://www.uniprot.org/uniprot/IPK_METJA IPK_METJA] Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids. Has no activity with farnesyl phosphate.<ref>PMID:16621811</ref> <ref>PMID:20392112</ref>
[[Category: Isopentenyl diphosphate]]
== Evolutionary Conservation ==
[[Category: Isopentenyl monophosphate]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Isoprenoid biosynthesis]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/3k4o_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k4o ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Mevalonate pathway]]
[[Category: Dellas N]]
[[Category: Small molecule kinase]]
[[Category: Noel JP]]
[[Category: Transferase]]

Latest revision as of 10:15, 21 February 2024

Crystal Structure of Isopentenyl Phosphate Kinase from Methanocaldococcus jannaschii

3k4o, resolution 2.05Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA