2e47: Difference between revisions

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[[Image:2e47.jpg|left|200px]]<br /><applet load="2e47" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2e47, resolution 2.11&Aring;" />
'''Crystal Structure Analysis of the clock protein EA4 (glycosylation form)'''<br />


==About this Structure==
==Crystal Structure Analysis of the clock protein EA4 (glycosylation form)==
2E47 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori] with <scene name='pdbligand=CU:'>CU</scene> and <scene name='pdbligand=ZN:'>ZN</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E47 OCA].  
<StructureSection load='2e47' size='340' side='right'caption='[[2e47]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2e47]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E47 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E47 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e47 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e47 OCA], [https://pdbe.org/2e47 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e47 RCSB], [https://www.ebi.ac.uk/pdbsum/2e47 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e47 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q08J22_BOMMO Q08J22_BOMMO] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).[RuleBase:RU000393]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e4/2e47_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e47 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bombyx mori]]
[[Category: Bombyx mori]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hiraki, T.]]
[[Category: Hiraki T]]
[[Category: Park, S Y.]]
[[Category: Park S-Y]]
[[Category: CU]]
[[Category: ZN]]
[[Category: glycoprotein]]
[[Category: metal binding protein]]
[[Category: motalloprotein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:05:49 2008''
Retrieved from "https://proteopedia.org/2e47"