3ky7: Difference between revisions
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== | ==2.35 Angstrom resolution crystal structure of a putative tRNA (guanine-7-)-methyltransferase (trmD) from Staphylococcus aureus subsp. aureus MRSA252== | ||
[[http://www.uniprot.org/uniprot/TRMD_STAAR TRMD_STAAR | <StructureSection load='3ky7' size='340' side='right'caption='[[3ky7]], [[Resolution|resolution]] 2.35Å' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3ky7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_MRSA252 Staphylococcus aureus subsp. aureus MRSA252]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KY7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KY7 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ky7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ky7 OCA], [https://pdbe.org/3ky7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ky7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ky7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ky7 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/TRMD_STAAR TRMD_STAAR] Specifically methylates guanosine-37 in various tRNAs (By similarity). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ky/3ky7_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ky7 ConSurf]. | |||
<div style="clear:both"></div> | |||
== | ==See Also== | ||
[[ | *[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]] | ||
[[Category: Staphylococcus aureus subsp. aureus]] | __TOC__ | ||
[[Category: Anderson | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Dubrovska | [[Category: Staphylococcus aureus subsp. aureus MRSA252]] | ||
[[Category: Halavaty | [[Category: Anderson WF]] | ||
[[Category: Minasov | [[Category: Dubrovska I]] | ||
[[Category: Reiner | [[Category: Halavaty AS]] | ||
[[Category: See | [[Category: Minasov G]] | ||
[[Category: Shuvalova | [[Category: Reiner N]] | ||
[[Category: Winsor | [[Category: See R]] | ||
[[Category: Zoraghi | [[Category: Shuvalova L]] | ||
[[Category: Winsor J]] | |||
[[Category: Zoraghi R]] | |||