3l8c: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3l8c|  PDB=3l8c  |  SCENE=  }}
===Structure of probable D-alanine--poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes===


==Function==
==Structure of probable D-alanine--poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes==
[[http://www.uniprot.org/uniprot/DLTA_STRP6 DLTA_STRP6]] Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp (By similarity).  
<StructureSection load='3l8c' size='340' side='right'caption='[[3l8c]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[3l8c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_M6 Streptococcus pyogenes serotype M6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L8C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L8C FirstGlance]. <br>
[[3l8c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_m6 Streptococcus pyogenes serotype m6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L8C OCA].  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.41&#8491;</td></tr>
[[Category: Streptococcus pyogenes serotype m6]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l8c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l8c OCA], [https://pdbe.org/3l8c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l8c RCSB], [https://www.ebi.ac.uk/pdbsum/3l8c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l8c ProSAT]</span></td></tr>
[[Category: Almo, S C.]]
</table>
[[Category: Burley, S K.]]
== Function ==
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[https://www.uniprot.org/uniprot/DLTA_STRP6 DLTA_STRP6] Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp (By similarity).
[[Category: Ramagopal, U A.]]
== Evolutionary Conservation ==
[[Category: Toro, R.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Atp-binding]]
Check<jmol>
[[Category: Dlta]]
  <jmolCheckbox>
[[Category: Ligase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/3l8c_consurf.spt"</scriptWhenChecked>
[[Category: New york sgx research center for structural genomic]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Nucleotide-binding]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Nysgxrc]]
  </jmolCheckbox>
[[Category: Protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l8c ConSurf].
[[Category: Psi-2]]
<div style="clear:both"></div>
[[Category: Structural genomic]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pyogenes serotype M6]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Ramagopal UA]]
[[Category: Toro R]]
Retrieved from "https://proteopedia.org/3l8c"