3lop: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
m Protected "3lop" [edit=sysop:move=sysop]
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3lop|  PDB=3lop  |  SCENE=  }}
===Crystal structure of substrate-binding periplasmic protein (Pbp) from Ralstonia solanacearum===
{{ABSTRACT_PUBMED_020356844}}


==About this Structure==
==Crystal structure of substrate-binding periplasmic protein (Pbp) from Ralstonia solanacearum==
[[3lop]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ralstonia_solanacearum Ralstonia solanacearum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOP OCA].  
<StructureSection load='3lop' size='340' side='right'caption='[[3lop]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[3lop]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ralstonia_solanacearum_GMI1000 Ralstonia solanacearum GMI1000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LOP FirstGlance]. <br>
<ref group="xtra">PMID:020356844</ref><references group="xtra"/><references/>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
[[Category: Ralstonia solanacearum]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LEU:LEUCINE'>LEU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
[[Category: Burley, S K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lop OCA], [https://pdbe.org/3lop PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lop RCSB], [https://www.ebi.ac.uk/pdbsum/3lop PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lop ProSAT]</span></td></tr>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</table>
[[Category: Palani, K.]]
== Function ==
[[Category: Swaminathan, S.]]
[https://www.uniprot.org/uniprot/Q8XUX2_RALN1 Q8XUX2_RALN1]  
[[Category: New york sgx research center for structural genomic]]
== Evolutionary Conservation ==
[[Category: Nysgxrc]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Structural genomic]]
Check<jmol>
[[Category: Substrate binding protein]]
  <jmolCheckbox>
[[Category: Substrate-binding]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lo/3lop_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lop ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Ralstonia solanacearum GMI1000]]
[[Category: Burley SK]]
[[Category: Palani K]]
[[Category: Swaminathan S]]