2eek: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /><applet load="2eek" size="350" color="white" frame="true" align="right" spinBox="true" caption="2eek, resolution 1.85Å" /> '''Crystal structure of... |
No edit summary |
||
| (15 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
== | ==Crystal structure of Atlantic cod trypsin complexed with benzamidine== | ||
<StructureSection load='2eek' size='340' side='right'caption='[[2eek]], [[Resolution|resolution]] 1.85Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2eek]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gadus_morhua Gadus morhua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EEK FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eek OCA], [https://pdbe.org/2eek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eek RCSB], [https://www.ebi.ac.uk/pdbsum/2eek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eek ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/TRY1_GADMO TRY1_GADMO] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/2eek_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eek ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Trypsin 3D structures|Trypsin 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Gadus morhua]] | [[Category: Gadus morhua]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Iyaguchi D]] | |||
[[Category: Iyaguchi | [[Category: Toyota E]] | ||
[[Category: Toyota | |||
Latest revision as of 09:05, 6 November 2024
Crystal structure of Atlantic cod trypsin complexed with benzamidine
| ||||||||||||
