3n2b: Difference between revisions
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== | ==1.8 Angstrom Resolution Crystal Structure of Diaminopimelate Decarboxylase (lysA) from Vibrio cholerae.== | ||
[[ | <StructureSection load='3n2b' size='340' side='right'caption='[[3n2b]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[3n2b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N2B FirstGlance]. <br> | ||
[[3n2b]] is a 4 chain structure with sequence from [ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
[[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
[[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n2b OCA], [https://pdbe.org/3n2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n2b RCSB], [https://www.ebi.ac.uk/pdbsum/3n2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n2b ProSAT]</span></td></tr> | ||
[[ | </table> | ||
[[ | == Function == | ||
[ | [https://www.uniprot.org/uniprot/DCDA_VIBCH DCDA_VIBCH] Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine (By similarity).[HAMAP-Rule:MF_02120] | ||
[[ | == Evolutionary Conservation == | ||
[[ | [[Image:Consurf_key_small.gif|200px|right]] | ||
[[Category: | Check<jmol> | ||
[[Category: | <jmolCheckbox> | ||
[[Category: | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n2/3n2b_consurf.spt"</scriptWhenChecked> | ||
[[Category: | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
[[Category: | <text>to colour the structure by Evolutionary Conservation</text> | ||
[[Category: | </jmolCheckbox> | ||
[[Category: | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n2b ConSurf]. | ||
[[Category: | <div style="clear:both"></div> | ||
[[Category: | __TOC__ | ||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]] | |||
[[Category: Anderson WF]] | |||
[[Category: Dubrovska I]] | |||
[[Category: Halavaty A]] | |||
[[Category: Minasov G]] | |||
[[Category: Papazisi L]] | |||
[[Category: Shuvalova L]] | |||
[[Category: Winsor J]] | |||
Latest revision as of 09:07, 6 September 2023
1.8 Angstrom Resolution Crystal Structure of Diaminopimelate Decarboxylase (lysA) from Vibrio cholerae.
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