2f4p: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(16 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2f4p.gif|left|200px]]<br /><applet load="2f4p" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2f4p, resolution 1.900&Aring;" />
'''Crystal structure of a cupin-like protein (tm1010) from Thermotoga maritima at 1.90 A resolution'''<br />


==About this Structure==
==Crystal structure of a cupin-like protein (tm1010) from thermotoga maritima msb8 at 1.90 A resolution==
2F4P is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima_msb8 Thermotoga maritima msb8] with <scene name='pdbligand=UNL:'>UNL</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F4P OCA].
<StructureSection load='2f4p' size='340' side='right'caption='[[2f4p]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermotoga maritima msb8]]
<table><tr><td colspan='2'>[[2f4p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F4P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F4P FirstGlance]. <br>
[[Category: JCSG, Joint Center for Structural Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: EDO]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: UNL]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f4p OCA], [https://pdbe.org/2f4p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f4p RCSB], [https://www.ebi.ac.uk/pdbsum/2f4p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f4p ProSAT], [https://www.topsan.org/Proteins/JCSG/2f4p TOPSAN]</span></td></tr>
[[Category: hypothetical protein]]
</table>
[[Category: jcsg]]
== Function ==
[[Category: joint center for structural genomics]]
[https://www.uniprot.org/uniprot/Q9X0A3_THEMA Q9X0A3_THEMA]  
[[Category: protein structure initiative]]
== Evolutionary Conservation ==
[[Category: psi]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: structural genomics]]
Check<jmol>
[[Category: tm1010]]
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f4/2f4p_consurf.spt"</scriptWhenChecked>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:17:39 2008''
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f4p ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima MSB8]]
Retrieved from "https://proteopedia.org/2f4p"