3oce: Difference between revisions

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{{STRUCTURE_3oce|  PDB=3oce  |  SCENE=  }}
===Crystal structure of fumarate lyase:delta crystallin from Brucella melitensis bound to cobalt===


==About this Structure==
==Crystal structure of fumarate lyase:delta crystallin from Brucella melitensis bound to cobalt==
[[3oce]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Brucella_melitensis Brucella melitensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCE OCA].  
<StructureSection load='3oce' size='340' side='right'caption='[[3oce]], [[Resolution|resolution]] 2.58&Aring;' scene=''>
[[Category: Aspartate ammonia-lyase]]
== Structural highlights ==
[[Category: Brucella melitensis]]
<table><tr><td colspan='2'>[[3oce]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Brucella_abortus_2308 Brucella abortus 2308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OCE FirstGlance]. <br>
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.58&#8491;</td></tr>
[[Category: Brucellosis]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
[[Category: Citric acid cycle]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oce FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oce OCA], [https://pdbe.org/3oce PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oce RCSB], [https://www.ebi.ac.uk/pdbsum/3oce PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oce ProSAT]</span></td></tr>
[[Category: Dehydration of fumarate to malate]]
</table>
[[Category: Epididymitis]]
== Function ==
[[Category: Fumarase]]
[https://www.uniprot.org/uniprot/Q2YLW1_BRUA2 Q2YLW1_BRUA2]  
[[Category: Fumarate lyase]]
== Evolutionary Conservation ==
[[Category: Kreb's cycle]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Lyase]]
Check<jmol>
[[Category: Mastitis]]
  <jmolCheckbox>
[[Category: Orchitis]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/3oce_consurf.spt"</scriptWhenChecked>
[[Category: Seattle structural genomics center for infectious disease]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Ssgcid]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Structural genomic]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oce ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Brucella abortus 2308]]
[[Category: Large Structures]]

Latest revision as of 09:34, 6 September 2023

Crystal structure of fumarate lyase:delta crystallin from Brucella melitensis bound to cobalt

3oce, resolution 2.58Å

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