2gjv: Difference between revisions

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[[Image:2gjv.gif|left|200px]]<br /><applet load="2gjv" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2gjv, resolution 2.39&Aring;" />
'''Crystal Structure of a Protein of Unknown Function from Salmonella typhimurium'''<br />


==About this Structure==
==Crystal Structure of a Protein of Unknown Function from Salmonella typhimurium==
2GJV is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium] with <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=CA:'>CA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJV OCA].  
<StructureSection load='2gjv' size='340' side='right'caption='[[2gjv]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
[[Category: Salmonella typhimurium]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2gjv]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GJV FirstGlance]. <br>
[[Category: Anderson, W F.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
[[Category: Brunzelle, J S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
[[Category: Collart, F R.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gjv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gjv OCA], [https://pdbe.org/2gjv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gjv RCSB], [https://www.ebi.ac.uk/pdbsum/2gjv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gjv ProSAT], [https://www.topsan.org/Proteins/MCSG/2gjv TOPSAN]</span></td></tr>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</table>
[[Category: Minasov, G.]]
== Function ==
[[Category: Shuvalova, L.]]
[https://www.uniprot.org/uniprot/Q8ZKJ0_SALTY Q8ZKJ0_SALTY]  
[[Category: Vorontsov, I I.]]
== Evolutionary Conservation ==
[[Category: CA]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: CL]]
Check<jmol>
[[Category: crystal structure]]
  <jmolCheckbox>
[[Category: mcsg]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gj/2gjv_consurf.spt"</scriptWhenChecked>
[[Category: midwest center for structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: psi]]
  </jmolCheckbox>
[[Category: structural genomics]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gjv ConSurf].
[[Category: unknown function]]
<div style="clear:both"></div>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:32:26 2008''
</StructureSection>
[[Category: Large Structures]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Anderson WF]]
[[Category: Brunzelle JS]]
[[Category: Collart FR]]
[[Category: Joachimiak A]]
[[Category: Minasov G]]
[[Category: Shuvalova L]]
[[Category: Vorontsov II]]