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[[Image:2gu1.gif|left|200px]]<br /><applet load="2gu1" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2gu1, resolution 1.90&Aring;" />
'''Crystal structure of a zinc containing peptidase from vibrio cholerae'''<br />


==About this Structure==
==Crystal structure of a zinc containing peptidase from vibrio cholerae==
2GU1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae] with <scene name='pdbligand=ZN:'>ZN</scene> and <scene name='pdbligand=NA:'>NA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GU1 OCA].  
<StructureSection load='2gu1' size='340' side='right'caption='[[2gu1]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
<table><tr><td colspan='2'>[[2gu1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GU1 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gu1 OCA], [https://pdbe.org/2gu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gu1 RCSB], [https://www.ebi.ac.uk/pdbsum/2gu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gu1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2gu1 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9KUL5_VIBCH Q9KUL5_VIBCH]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2gu1_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gu1 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Vibrio cholerae]]
[[Category: Vibrio cholerae]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Kumaran, D.]]
[[Category: Kumaran D]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Sugadev R]]
[[Category: Sugadev, R.]]
[[Category: Swaminathan S]]
[[Category: Swaminathan, S.]]
[[Category: NA]]
[[Category: ZN]]
[[Category: alpha/beta]]
[[Category: beta barrel]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
[[Category: zinc peptidase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:35:20 2008''

Latest revision as of 09:29, 14 February 2024

Crystal structure of a zinc containing peptidase from vibrio cholerae

2gu1, resolution 1.90Å

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