4lb0: Difference between revisions
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==Crystal structure of a hydroxyproline epimerase from agrobacterium vitis, target efi-506420, with bound trans-4-oh-l-proline== | |||
<StructureSection load='4lb0' size='340' side='right'caption='[[4lb0]], [[Resolution|resolution]] 1.70Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[4lb0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_vitis_S4 Agrobacterium vitis S4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LB0 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lb0 OCA], [https://pdbe.org/4lb0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lb0 RCSB], [https://www.ebi.ac.uk/pdbsum/4lb0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lb0 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/4HYPE_AGRVS 4HYPE_AGRVS] Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). May be involved in a degradation pathway of t4LHyp. Can also catalyze the epimerization of trans-3-hydroxy-L-proline (t3LHyp) to cis-3-hydroxy-D-proline (c3DHyp) in vitro. Displays no proline racemase activity.<ref>PMID:24980702</ref> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Agrobacterium vitis S4]] | |||
[[Category: Large Structures]] | |||
[[Category: Al Obaidi NF]] | |||
[[Category: Almo SC]] | |||
[[Category: Bhosle R]] | |||
[[Category: Chowdhury S]] | |||
[[Category: Evans B]] | |||
[[Category: Gerlt JA]] | |||
[[Category: Glenn AS]] | |||
[[Category: Hammonds J]] | |||
[[Category: Hillerich B]] | |||
[[Category: Imker HJ]] | |||
[[Category: Love J]] | |||
[[Category: Morisco LL]] | |||
[[Category: Seidel RD]] | |||
[[Category: Sojitra S]] | |||
[[Category: Stead M]] | |||
[[Category: Toro R]] | |||
[[Category: Vetting MW]] | |||
[[Category: Washington E]] | |||
[[Category: Wasserman SR]] | |||
Latest revision as of 16:15, 20 September 2023
Crystal structure of a hydroxyproline epimerase from agrobacterium vitis, target efi-506420, with bound trans-4-oh-l-proline
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