2iml: Difference between revisions

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[[Image:2iml.gif|left|200px]]<br /><applet load="2iml" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2iml, resolution 1.65&Aring;" />
'''Crystal structure of a hypothetical protein from Archaeoglobus fulgidus binding riboflavin 5'-phosphate'''<br />


==About this Structure==
==Crystal structure of a hypothetical protein from Archaeoglobus fulgidus binding riboflavin 5'-phosphate==
2IML is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus] with <scene name='pdbligand=FMN:'>FMN</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IML OCA].
<StructureSection load='2iml' size='340' side='right'caption='[[2iml]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
[[Category: Archaeoglobus fulgidus]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IML OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IML FirstGlance]. <br>
[[Category: Adams, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
[[Category: Almo, S C.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Bain, K T.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iml OCA], [https://pdbe.org/2iml PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iml RCSB], [https://www.ebi.ac.uk/pdbsum/2iml PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iml ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2iml TOPSAN]</span></td></tr>
[[Category: Bonanno, J B.]]
</table>
[[Category: Burley, S K.]]
== Evolutionary Conservation ==
[[Category: Dickey, M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
Check<jmol>
[[Category: Ozyurt, S.]]
  <jmolCheckbox>
[[Category: Sauder, J M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/im/2iml_consurf.spt"</scriptWhenChecked>
[[Category: Wasserman, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: FMN]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: GOL]]
  </jmolCheckbox>
[[Category: fmn binding]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iml ConSurf].
[[Category: new york structural genomix research consortium]]
<div style="clear:both"></div>
[[Category: nysgxrc]]
__TOC__
[[Category: protein structure initiative]]
</StructureSection>
[[Category: psi-2]]
[[Category: Large Structures]]
[[Category: structural genomics]]
[[Category: Adams J]]
 
[[Category: Almo SC]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:54:03 2008''
[[Category: Bain KT]]
[[Category: Bonanno JB]]
[[Category: Burley SK]]
[[Category: Dickey M]]
[[Category: Ozyurt S]]
[[Category: Sauder JM]]
[[Category: Wasserman S]]
Retrieved from "https://proteopedia.org/2iml"