4kdz: Difference between revisions

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{{STRUCTURE_4kdz|  PDB=4kdz  |  SCENE=  }}
===Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)===


==Function==
==Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)==
[[http://www.uniprot.org/uniprot/Q1R4Y9_ECOUT Q1R4Y9_ECOUT]] Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide (By similarity).[HAMAP-Rule:MF_01885]  
<StructureSection load='4kdz' size='340' side='right'caption='[[4kdz]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4kdz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_UTI89 Escherichia coli UTI89]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KDZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KDZ FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.32&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kdz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kdz OCA], [https://pdbe.org/4kdz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kdz RCSB], [https://www.ebi.ac.uk/pdbsum/4kdz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kdz ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q1R4Y9_ECOUT Q1R4Y9_ECOUT] Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide (By similarity).[HAMAP-Rule:MF_01885]


==About this Structure==
==See Also==
[[4kdz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_uti89 Escherichia coli uti89]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KDZ OCA].
*[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]]
[[Category: Escherichia coli uti89]]
__TOC__
[[Category: Almo, S C.]]
</StructureSection>
[[Category: Bhosle, R.]]
[[Category: Escherichia coli UTI89]]
[[Category: Kim, J.]]
[[Category: Large Structures]]
[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
[[Category: Almo SC]]
[[Category: Toro, R.]]
[[Category: Bhosle R]]
[[Category: New york structural genomics research consortium]]
[[Category: Kim J]]
[[Category: Nysgrc]]
[[Category: Toro R]]
[[Category: Psi-biology]]
[[Category: S-adenosyl-l-methionine]]
[[Category: Spou methyltransferase]]
[[Category: Structural genomic]]
[[Category: Transferase]]
Retrieved from "https://proteopedia.org/4kdz"