2p0i: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2p0i.jpg|left|200px]]<br /><applet load="2p0i" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2p0i, resolution 2.10&Aring;" />
'''Crystal structure of L-rhamnonate dehydratase from Gibberella zeae'''<br />


==About this Structure==
==Crystal structure of L-rhamnonate dehydratase from Gibberella zeae==
2P0I is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Gibberella_zeae Gibberella zeae] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/L-rhamnonate_dehydratase L-rhamnonate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.90 4.2.1.90] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0I OCA].
<StructureSection load='2p0i' size='340' side='right'caption='[[2p0i]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
[[Category: Gibberella zeae]]
== Structural highlights ==
[[Category: L-rhamnonate dehydratase]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P0I FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
[[Category: Almo, S C.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Burley, S K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p0i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0i OCA], [https://pdbe.org/2p0i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p0i RCSB], [https://www.ebi.ac.uk/pdbsum/2p0i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0i ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p0i TOPSAN]</span></td></tr>
[[Category: Dickey, M.]]
</table>
[[Category: Gerlt, J.]]
== Evolutionary Conservation ==
[[Category: Gheyi, T.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Logan, C.]]
Check<jmol>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
  <jmolCheckbox>
[[Category: Patskovsky, Y.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p0/2p0i_consurf.spt"</scriptWhenChecked>
[[Category: Sauder, J M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Smith, D.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Toro, R.]]
  </jmolCheckbox>
[[Category: Wasserman, S R.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p0i ConSurf].
[[Category: GOL]]
<div style="clear:both"></div>
[[Category: SO4]]
__TOC__
[[Category: enolase]]
</StructureSection>
[[Category: new york structural genomics research consortium]]
[[Category: Large Structures]]
[[Category: new york structural genomix research consortium]]
[[Category: Almo SC]]
[[Category: nysgrc]]
[[Category: Burley SK]]
[[Category: nysgxrc]]
[[Category: Dickey M]]
[[Category: protein structure initiative]]
[[Category: Gerlt J]]
[[Category: psi]]
[[Category: Gheyi T]]
[[Category: structural genomics]]
[[Category: Logan C]]
 
[[Category: Patskovsky Y]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:24:30 2008''
[[Category: Sauder JM]]
[[Category: Smith D]]
[[Category: Toro R]]
[[Category: Wasserman SR]]

Latest revision as of 08:26, 30 October 2024

Crystal structure of L-rhamnonate dehydratase from Gibberella zeae

2p0i, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA