4k2m: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_4k2m|  PDB=4k2m  |  SCENE=  }}
===Crystal structure of ntda from bacillus subtilis in complex with the plp external aldimine adduct with kanosamine-6-phosphate===


==Function==
==Crystal structure of ntda from bacillus subtilis in complex with the plp external aldimine adduct with kanosamine-6-phosphate==
[[http://www.uniprot.org/uniprot/NTDA_BACSU NTDA_BACSU]] Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic.
<StructureSection load='4k2m' size='340' side='right'caption='[[4k2m]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[4k2m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K2M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K2M FirstGlance]. <br>
[[4k2m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K2M OCA].  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=O1G:3-DEOXY-3-[(E)-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)AMINO]-6-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE'>O1G</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k2m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k2m OCA], [https://pdbe.org/4k2m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k2m RCSB], [https://www.ebi.ac.uk/pdbsum/4k2m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k2m ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NTDA_BACSU NTDA_BACSU] Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic.
__TOC__
</StructureSection>
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Palmer, D R.J.]]
[[Category: Large Structures]]
[[Category: Sanders, D A.R.]]
[[Category: Palmer DRJ]]
[[Category: Straaten, K E.Van.]]
[[Category: Sanders DAR]]
[[Category: 3-keto-glucose-6-phosphate aminitransferase]]
[[Category: Van Straaten KE]]
[[Category: Additional n-terninal domain]]
[[Category: Aspertate aminotransferase fold]]
[[Category: Homo-dimer]]
[[Category: Kanosamine-6-phosphate]]
[[Category: Sugar aminotransferase]]
[[Category: Transferase]]

Latest revision as of 14:06, 13 March 2024

Crystal structure of ntda from bacillus subtilis in complex with the plp external aldimine adduct with kanosamine-6-phosphate

4k2m, resolution 1.71Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA