2pkh: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pkh.gif|left|200px]]<br /><applet load="2pkh" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2pkh, resolution 1.95&Aring;" />
'''Structural Genomics, the crystal structure of the C-terminal domain of histidine utilization repressor from Pseudomonas syringae pv. tomato str. DC3000'''<br />


==About this Structure==
==Structural Genomics, the crystal structure of the C-terminal domain of histidine utilization repressor from Pseudomonas syringae pv. tomato str. DC3000==
2PKH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._dc3000 Pseudomonas syringae pv. tomato str. dc3000] with <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKH OCA].  
<StructureSection load='2pkh' size='340' side='right'caption='[[2pkh]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
[[Category: Pseudomonas syringae pv. tomato str. dc3000]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2pkh]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._DC3000 Pseudomonas syringae pv. tomato str. DC3000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PKH FirstGlance]. <br>
[[Category: Clancy, S.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pkh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pkh OCA], [https://pdbe.org/2pkh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pkh RCSB], [https://www.ebi.ac.uk/pdbsum/2pkh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pkh ProSAT], [https://www.topsan.org/Proteins/MCSG/2pkh TOPSAN]</span></td></tr>
[[Category: Tan, K.]]
</table>
[[Category: Zhou, M.]]
== Function ==
[[Category: EDO]]
[https://www.uniprot.org/uniprot/Q87UX0_PSESM Q87UX0_PSESM]  
[[Category: apc84836]]
== Evolutionary Conservation ==
[[Category: histidine utilization repressor]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: mcsg]]
Check<jmol>
[[Category: midwest center for structural genomics]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pkh_consurf.spt"</scriptWhenChecked>
[[Category: pseudomonas syringae pv. tomato str. dc3000]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: psi-2]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pkh ConSurf].
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:30:22 2008''
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pseudomonas syringae pv. tomato str. DC3000]]
[[Category: Clancy S]]
[[Category: Joachimiak A]]
[[Category: Tan K]]
[[Category: Zhou M]]

Latest revision as of 05:26, 17 October 2024

Structural Genomics, the crystal structure of the C-terminal domain of histidine utilization repressor from Pseudomonas syringae pv. tomato str. DC3000

2pkh, resolution 1.95Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA