2pok: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pok.jpg|left|200px]]<br /><applet load="2pok" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2pok, resolution 1.90&Aring;" />
'''Crystal structure of a M20 family metallo peptidase from Streptococcus pneumoniae'''<br />


==About this Structure==
==Crystal structure of a M20 family metallo peptidase from Streptococcus pneumoniae==
2POK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae] with <scene name='pdbligand=BGC:'>BGC</scene> and <scene name='pdbligand=MN:'>MN</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2POK OCA].
<StructureSection load='2pok' size='340' side='right'caption='[[2pok]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Streptococcus pneumoniae]]
<table><tr><td colspan='2'>[[2pok]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2POK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2POK FirstGlance]. <br>
[[Category: Anderson, W F.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Brunzelle, J S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
[[Category: Collart, F R.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pok FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pok OCA], [https://pdbe.org/2pok PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pok RCSB], [https://www.ebi.ac.uk/pdbsum/2pok PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pok ProSAT], [https://www.topsan.org/Proteins/MCSG/2pok TOPSAN]</span></td></tr>
[[Category: Joachimiak, A.]]
</table>
[[Category: Kiryukhina, O.]]
== Function ==
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[https://www.uniprot.org/uniprot/A0A0H2UN21_STRPN A0A0H2UN21_STRPN]  
[[Category: Minasov, G.]]
== Evolutionary Conservation ==
[[Category: Shuvalova, L.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Vorontsov, I I.]]
Check<jmol>
[[Category: BGC]]
  <jmolCheckbox>
[[Category: MN]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/po/2pok_consurf.spt"</scriptWhenChecked>
[[Category: crystal structure]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: m20 family peptidase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: mcsg]]
  </jmolCheckbox>
[[Category: metallo protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pok ConSurf].
[[Category: midwest center for structural genomics]]
<div style="clear:both"></div>
[[Category: protein structure initiative]]
__TOC__
[[Category: psi-2]]
</StructureSection>
[[Category: structural genomics]]
[[Category: Large Structures]]
 
[[Category: Streptococcus pneumoniae TIGR4]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:31:32 2008''
[[Category: Anderson WF]]
[[Category: Brunzelle JS]]
[[Category: Collart FR]]
[[Category: Joachimiak A]]
[[Category: Kiryukhina O]]
[[Category: Minasov G]]
[[Category: Shuvalova L]]
[[Category: Vorontsov II]]
Retrieved from "https://proteopedia.org/2pok"