2qde: Difference between revisions

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[[Image:2qde.gif|left|200px]]<br /><applet load="2qde" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2qde, resolution 1.93&Aring;" />
'''Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1'''<br />


==About this Structure==
==Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1==
2QDE is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Azoarcus_sp._ebn1 Azoarcus sp. ebn1] with <scene name='pdbligand=BA:'>BA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDE OCA].
<StructureSection load='2qde' size='340' side='right'caption='[[2qde]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
[[Category: Azoarcus sp. ebn1]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2qde]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aromatoleum_aromaticum_EbN1 Aromatoleum aromaticum EbN1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QDE FirstGlance]. <br>
[[Category: Agarwal, R.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
[[Category: Burley, S K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene></td></tr>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qde OCA], [https://pdbe.org/2qde PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qde RCSB], [https://www.ebi.ac.uk/pdbsum/2qde PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qde ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qde TOPSAN]</span></td></tr>
[[Category: Swaminathan, S.]]
</table>
[[Category: BA]]
== Function ==
[[Category: 9379a]]
[https://www.uniprot.org/uniprot/Q5P025_AROAE Q5P025_AROAE]  
[[Category: crystal structure]]
== Evolutionary Conservation ==
[[Category: enolase]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: new york structural genomix research consortium]]
Check<jmol>
[[Category: nysgxrc]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qd/2qde_consurf.spt"</scriptWhenChecked>
[[Category: psi-2]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: psi-ii]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qde ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:38:19 2008''
==See Also==
*[[Mandelate racemase|Mandelate racemase]]
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
__TOC__
</StructureSection>
[[Category: Aromatoleum aromaticum EbN1]]
[[Category: Large Structures]]
[[Category: Agarwal R]]
[[Category: Burley SK]]
[[Category: Swaminathan S]]
Retrieved from "https://proteopedia.org/2qde"