2r2z: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2r2z.jpg|left|200px]]<br /><applet load="2r2z" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2r2z, resolution 1.20&Aring;" />
'''The crystal structure of a hemolysin domain from Enterococcus faecalis V583'''<br />


==About this Structure==
==The crystal structure of a hemolysin domain from Enterococcus faecalis V583==
2R2Z is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis_v583 Enterococcus faecalis v583] with <scene name='pdbligand=ZN:'>ZN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R2Z OCA].  
<StructureSection load='2r2z' size='340' side='right'caption='[[2r2z]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
[[Category: Enterococcus faecalis v583]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2r2z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R2Z FirstGlance]. <br>
[[Category: Bargassa, M.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r2z OCA], [https://pdbe.org/2r2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r2z RCSB], [https://www.ebi.ac.uk/pdbsum/2r2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r2z ProSAT], [https://www.topsan.org/Proteins/MCSG/2r2z TOPSAN]</span></td></tr>
[[Category: Tan, K.]]
</table>
[[Category: Zhang, R.]]
== Function ==
[[Category: Zhou, M.]]
[https://www.uniprot.org/uniprot/Q837X5_ENTFA Q837X5_ENTFA]  
[[Category: ZN]]
== Evolutionary Conservation ==
[[Category: apc85144]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: enterococcus faecalis v583]]
Check<jmol>
[[Category: hemolysin domain]]
  <jmolCheckbox>
[[Category: mcsg]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r2/2r2z_consurf.spt"</scriptWhenChecked>
[[Category: membrane]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: midwest center for structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: protein structure initiative]]
  </jmolCheckbox>
[[Category: psi-2]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r2z ConSurf].
[[Category: structure initiative]]
<div style="clear:both"></div>
[[Category: toxin]]
[[Category: transmembrane]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:44:12 2008''
==See Also==
*[[Hemolysin 3D structures|Hemolysin 3D structures]]
__TOC__
</StructureSection>
[[Category: Enterococcus faecalis V583]]
[[Category: Large Structures]]
[[Category: Bargassa M]]
[[Category: Joachimiak A]]
[[Category: Tan K]]
[[Category: Zhang R]]
[[Category: Zhou M]]