2ras: Difference between revisions

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[[Image:2ras.gif|left|200px]]<br /><applet load="2ras" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2ras, resolution 1.800&Aring;" />
'''Crystal structure of predicted transcriptional regulator of TetR/AcrR family (YP_495839.1) from Novosphingobium aromaticivorans DSM 12444 at 1.80 A resolution'''<br />


==About this Structure==
==Crystal structure of a putative tetr/acrr family transcriptional regulator (saro_0558) from novosphingobium aromaticivorans dsm at 1.80 A resolution==
2RAS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_dsm_12444 Novosphingobium aromaticivorans dsm 12444] with <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAS OCA].
<StructureSection load='2ras' size='340' side='right'caption='[[2ras]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
[[Category: Novosphingobium aromaticivorans dsm 12444]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2ras]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_DSM_12444 Novosphingobium aromaticivorans DSM 12444]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RAS FirstGlance]. <br>
[[Category: JCSG, Joint Center for Structural Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
[[Category: CL]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: EDO]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ras FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ras OCA], [https://pdbe.org/2ras PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ras RCSB], [https://www.ebi.ac.uk/pdbsum/2ras PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ras ProSAT], [https://www.topsan.org/Proteins/JCSG/2ras TOPSAN]</span></td></tr>
[[Category: bacterial regulatory proteins]]
</table>
[[Category: dna-binding]]
== Function ==
[[Category: jcsg]]
[https://www.uniprot.org/uniprot/Q2GAW8_NOVAD Q2GAW8_NOVAD]  
[[Category: joint center for structural genomics]]
== Evolutionary Conservation ==
[[Category: predicted transcriptional regulator of tetr/acrr family]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: protein structure initiative]]
Check<jmol>
[[Category: psi-2]]
  <jmolCheckbox>
[[Category: structural genomics]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ras_consurf.spt"</scriptWhenChecked>
[[Category: tetr family]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: transcription regulation]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: yp_495839 1]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ras ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:45:59 2008''
==See Also==
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Novosphingobium aromaticivorans DSM 12444]]
Retrieved from "https://proteopedia.org/2ras"