2yyt: Difference between revisions

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[[Image:2yyt.jpg|left|200px]]<br /><applet load="2yyt" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2yyt, resolution 2.30&Aring;" />
'''Crystal structure of uncharacterized conserved protein from Thermotoga maritima'''<br />


==About this Structure==
==Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus==
2YYT is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Active as [http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYT OCA].  
<StructureSection load='2yyt' size='340' side='right'caption='[[2yyt]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
[[Category: Geobacillus kaustophilus]]
== Structural highlights ==
[[Category: Orotidine-5'-phosphate decarboxylase]]
<table><tr><td colspan='2'>[[2yyt]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YYT FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
[[Category: Baba, S.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yyt OCA], [https://pdbe.org/2yyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yyt RCSB], [https://www.ebi.ac.uk/pdbsum/2yyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yyt ProSAT], [https://www.topsan.org/Proteins/RSGI/2yyt TOPSAN]</span></td></tr>
[[Category: Bessho, Y.]]
</table>
[[Category: Kanagawa, M.]]
== Function ==
[[Category: Kawai, G.]]
[https://www.uniprot.org/uniprot/PYRF_GEOKA PYRF_GEOKA] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP) (By similarity).
[[Category: Kuramitsu, S.]]
== Evolutionary Conservation ==
[[Category: Nakamura, Y.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
Check<jmol>
[[Category: Sampei, G.]]
  <jmolCheckbox>
[[Category: Yokoyama, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yyt_consurf.spt"</scriptWhenChecked>
[[Category: lyase]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: national project on protein structural and functional analyses]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: nppsfa]]
  </jmolCheckbox>
[[Category: riken structural genomics/proteomics initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yyt ConSurf].
[[Category: rsgi]]
<div style="clear:both"></div>
[[Category: structural genomics]]
[[Category: tim barrel]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:58:48 2008''
==See Also==
*[[Uridine 5'-monophosphate synthase 3D structures|Uridine 5'-monophosphate synthase 3D structures]]
__TOC__
</StructureSection>
[[Category: Geobacillus kaustophilus HTA426]]
[[Category: Large Structures]]
[[Category: Baba S]]
[[Category: Bessho Y]]
[[Category: Kanagawa M]]
[[Category: Kawai G]]
[[Category: Kuramitsu S]]
[[Category: Nakamura Y]]
[[Category: Sampei G]]
[[Category: Yokoyama S]]
Retrieved from "https://proteopedia.org/2yyt"