4pvs: Difference between revisions

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New page: {{STRUCTURE_4pvs| PDB=4pvs | SCENE= }} ===Crystal structure of fully-cleaved human l-asparaginase protein in complex with l-aspartate=== {{ABSTRACT_PUBMED_22861376}} ==Function== [[h...
 
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{{STRUCTURE_4pvs|  PDB=4pvs  |  SCENE=  }}
===Crystal structure of fully-cleaved human l-asparaginase protein in complex with l-aspartate===
{{ABSTRACT_PUBMED_22861376}}


==Function==
==Crystal structure of fully-cleaved human l-asparaginase protein in complex with l-aspartate==
[[http://www.uniprot.org/uniprot/ASGL1_HUMAN ASGL1_HUMAN]] Has both L-asparaginase and beta-aspartyl peptidase activity. May be involved in the production of L-aspartate, which can act as an excitatory neurotransmitter in some brain regions. Is highly active with L-Asp beta-methyl ester. Besides, has catalytic activity toward beta-aspartyl dipeptides and their methyl esters, including beta-L-Asp-L-Phe, beta-L-Asp-L-Phe methyl ester (aspartame), beta-L-Asp-L-Ala, beta-L-Asp-L-Leu and beta-L-Asp-L-Lys. Does not have aspartylglucosaminidase activity and is inactive toward GlcNAc-L-Asn. Likewise, has no activity toward glutamine.<ref>PMID:19839645</ref>
<StructureSection load='4pvs' size='340' side='right'caption='[[4pvs]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4pvs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4gdw 4gdw]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PVS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PVS FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pvs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pvs OCA], [https://pdbe.org/4pvs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pvs RCSB], [https://www.ebi.ac.uk/pdbsum/4pvs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pvs ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ASGL1_HUMAN ASGL1_HUMAN] Has both L-asparaginase and beta-aspartyl peptidase activity. May be involved in the production of L-aspartate, which can act as an excitatory neurotransmitter in some brain regions. Is highly active with L-Asp beta-methyl ester. Besides, has catalytic activity toward beta-aspartyl dipeptides and their methyl esters, including beta-L-Asp-L-Phe, beta-L-Asp-L-Phe methyl ester (aspartame), beta-L-Asp-L-Ala, beta-L-Asp-L-Leu and beta-L-Asp-L-Lys. Does not have aspartylglucosaminidase activity and is inactive toward GlcNAc-L-Asn. Likewise, has no activity toward glutamine.<ref>PMID:19839645</ref>  


==About this Structure==
==See Also==
[[4pvs]] is a 2 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4gdw 4gdw]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PVS OCA].
*[[Asparaginase 3D structures|Asparaginase 3D structures]]
 
== References ==
==Reference==
<references/>
<ref group="xtra">PMID:022861376</ref><references group="xtra"/><references/>
__TOC__
[[Category: Lavie, A.]]
</StructureSection>
[[Category: Nomme, J.]]
[[Category: Homo sapiens]]
[[Category: Homodimer]]
[[Category: Large Structures]]
[[Category: Hydrolase]]
[[Category: Lavie A]]
[[Category: L-asparagine]]
[[Category: Nomme J]]
[[Category: Ntn enzyme]]

Latest revision as of 12:43, 1 March 2024

Crystal structure of fully-cleaved human l-asparaginase protein in complex with l-aspartate

4pvs, resolution 1.84Å

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