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New page: left|200px<br /><applet load="2yys" size="350" color="white" frame="true" align="right" spinBox="true" caption="2yys, resolution 2.20Å" /> '''Crystal structure of...
 
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[[Image:2yys.jpg|left|200px]]<br /><applet load="2yys" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2yys, resolution 2.20&Aring;" />
'''Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8'''<br />


==About this Structure==
==Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8==
2YYS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Sites: <scene name='pdbsite=AC1:Gol+Binding+Site+For+Residue+A+500'>AC1</scene>, <scene name='pdbsite=AC2:Gol+Binding+Site+For+Residue+A+501'>AC2</scene>, <scene name='pdbsite=AC3:Gol+Binding+Site+For+Residue+A+502'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+B+1500'>AC4</scene>, <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+B+1501'>AC5</scene> and <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+B+1502'>AC6</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYS OCA].  
<StructureSection load='2yys' size='340' side='right'caption='[[2yys]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[2yys]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YYS FirstGlance]. <br>
Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8., Okai M, Miyauchi Y, Ebihara A, Lee WC, Nagata K, Tanokura M, Proteins. 2008 Jan 3;70(4):1646-1649. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18175319 18175319]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: Single protein]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
[[Category: Thermus thermophilus]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yys OCA], [https://pdbe.org/2yys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yys RCSB], [https://www.ebi.ac.uk/pdbsum/2yys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yys ProSAT]</span></td></tr>
[[Category: Ebihara, A.]]
</table>
[[Category: Lee, W C.]]
== Function ==
[[Category: Miyauchi, Y.]]
[https://www.uniprot.org/uniprot/Q5SHC1_THET8 Q5SHC1_THET8]  
[[Category: Nagata, K.]]
== Evolutionary Conservation ==
[[Category: Okai, M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Tanokura, M.]]
Check<jmol>
[[Category: GOL]]
  <jmolCheckbox>
[[Category: crystal structure]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yys_consurf.spt"</scriptWhenChecked>
[[Category: proline iminopeptidase-related protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: ttha1809]]
  </jmolCheckbox>
[[Category: unknown function]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yys ConSurf].
 
<div style="clear:both"></div>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 27 07:59:32 2008''
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Ebihara A]]
[[Category: Lee WC]]
[[Category: Miyauchi Y]]
[[Category: Nagata K]]
[[Category: Okai M]]
[[Category: Tanokura M]]

Latest revision as of 13:55, 13 March 2024

Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8

2yys, resolution 2.20Å

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