2eg4: Difference between revisions

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New page: left|200px<br /><applet load="2eg4" size="350" color="white" frame="true" align="right" spinBox="true" caption="2eg4, resolution 1.70Å" /> '''Crystal Structure of...
 
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[[Image:2eg4.jpg|left|200px]]<br /><applet load="2eg4" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2eg4, resolution 1.70&Aring;" />
'''Crystal Structure of Probable Thiosulfate Sulfurtransferase'''<br />


==About this Structure==
==Crystal Structure of Probable Thiosulfate Sulfurtransferase==
2EG4 is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with <scene name='pdbligand=ZN:'>ZN</scene> and <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+B+302'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+501'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+B+502'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+B+503'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+A+504'>AC6</scene>, <scene name='pdbsite=AC7:So4+Binding+Site+For+Residue+A+505'>AC7</scene>, <scene name='pdbsite=AC8:So4+Binding+Site+For+Residue+A+506'>AC8</scene> and <scene name='pdbsite=AC9:So4+Binding+Site+For+Residue+A+507'>AC9</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EG4 OCA].
<StructureSection load='2eg4' size='340' side='right'caption='[[2eg4]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
[[Category: Protein complex]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[2eg4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EG4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EG4 FirstGlance]. <br>
[[Category: Ebihara, A.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
[[Category: Kitamura, Y.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: Kuramitsu, S.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eg4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eg4 OCA], [https://pdbe.org/2eg4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eg4 RCSB], [https://www.ebi.ac.uk/pdbsum/2eg4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eg4 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eg4 TOPSAN]</span></td></tr>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
</table>
[[Category: Sakai, H.]]
== Function ==
[[Category: Shinkai, A.]]
[https://www.uniprot.org/uniprot/Q5SHV8_THET8 Q5SHV8_THET8]  
[[Category: Yokoyama, S.]]
== Evolutionary Conservation ==
[[Category: SO4]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: ZN]]
Check<jmol>
[[Category: national project on protein structural and functional analyse]]
  <jmolCheckbox>
[[Category: nppsfa]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eg/2eg4_consurf.spt"</scriptWhenChecked>
[[Category: riken structural genomics/proteomics initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: rsgi]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomic]]
  </jmolCheckbox>
[[Category: sulfurtransferase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eg4 ConSurf].
 
<div style="clear:both"></div>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar  5 13:20:14 2008''
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Ebihara A]]
[[Category: Kitamura Y]]
[[Category: Kuramitsu S]]
[[Category: Sakai H]]
[[Category: Shinkai A]]
[[Category: Yokoyama S]]

Latest revision as of 00:53, 21 November 2024

Crystal Structure of Probable Thiosulfate Sulfurtransferase

2eg4, resolution 1.70Å

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