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{{STRUCTURE_1yd0|  PDB=1yd0  |  SCENE=  }}
===Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima bound to its catalytic divalent cation: manganese===
{{ABSTRACT_PUBMED_15692561}}


==Function==
==Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima bound to its catalytic divalent cation: manganese==
[[http://www.uniprot.org/uniprot/UVRC_THEMA UVRC_THEMA]] The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision (By similarity).  
<StructureSection load='1yd0' size='340' side='right'caption='[[1yd0]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[1yd0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD0 FirstGlance]. <br>
[[1yd0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD0 OCA].  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd0 OCA], [https://pdbe.org/1yd0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd0 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd0 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/UVRC_THEMA UVRC_THEMA] The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1yd0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yd0 ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[UvrABC|UvrABC]]
*[[UvrABC|UvrABC]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:015692561</ref><references group="xtra"/><references/>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Croteau, D L.]]
[[Category: Croteau DL]]
[[Category: DellaVecchia, M J.]]
[[Category: DellaVecchia MJ]]
[[Category: Houten, B Van.]]
[[Category: Karakas E]]
[[Category: Karakas, E.]]
[[Category: Kisker C]]
[[Category: Kisker, C.]]
[[Category: Rhau B]]
[[Category: Rhau, B.]]
[[Category: Skorvaga M]]
[[Category: Skorvaga, M.]]
[[Category: Truglio JJ]]
[[Category: Truglio, J J.]]
[[Category: Van Houten B]]
[[Category: Wang, H.]]
[[Category: Wang H]]
[[Category: Wang, L.]]
[[Category: Wang L]]
[[Category: Dna binding protein]]
Retrieved from "https://proteopedia.org/1yd0"