2zbc: Difference between revisions

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New page: left|200px<br /><applet load="2zbc" size="350" color="white" frame="true" align="right" spinBox="true" caption="2zbc, resolution 1.90Å" /> '''Crystal structure of...
 
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[[Image:2zbc.jpg|left|200px]]<br /><applet load="2zbc" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2zbc, resolution 1.90&Aring;" />
'''Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7.'''<br />


==About this Structure==
==Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7.==
2ZBC is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii] with <scene name='pdbligand=ILE:'>ILE</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Sites: <scene name='pdbsite=AC1:ILE+Binding+Site+For+Residue+A+84'>AC1</scene>, <scene name='pdbsite=AC2:ILE+Binding+Site+For+Residue+B+84'>AC2</scene>, <scene name='pdbsite=AC3:ILE+Binding+Site+For+Residue+A+85'>AC3</scene>, <scene name='pdbsite=AC4:ILE+Binding+Site+For+Residue+B+85'>AC4</scene>, <scene name='pdbsite=AC5:ILE+Binding+Site+For+Residue+E+84'>AC5</scene>, <scene name='pdbsite=AC6:ILE+Binding+Site+For+Residue+F+84'>AC6</scene>, <scene name='pdbsite=AC7:ILE+Binding+Site+For+Residue+G+84'>AC7</scene> and <scene name='pdbsite=AC8:ILE+Binding+Site+For+Residue+F+85'>AC8</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZBC OCA].  
<StructureSection load='2zbc' size='340' side='right'caption='[[2zbc]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[2zbc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZBC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZBC FirstGlance]. <br>
Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7., Miyazono KI, Tsujimura M, Kawarabayasi Y, Tanokura M, Proteins. 2008 Feb 25;. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18300246 18300246]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Single protein]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ILE:ISOLEUCINE'>ILE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Sulfolobus tokodaii]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zbc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zbc OCA], [https://pdbe.org/2zbc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zbc RCSB], [https://www.ebi.ac.uk/pdbsum/2zbc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zbc ProSAT]</span></td></tr>
[[Category: Kawarabayasi, Y.]]
</table>
[[Category: Miyazono, K.]]
== Function ==
[[Category: Tanokura, M.]]
[https://www.uniprot.org/uniprot/Q975W5_SULTO Q975W5_SULTO]
[[Category: Tsujimura, M.]]
== Evolutionary Conservation ==
[[Category: ILE]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: sard]]
Check<jmol>
[[Category: transcription]]
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zb/2zbc_consurf.spt"</scriptWhenChecked>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Mar 14 09:38:10 2008''
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zbc ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Sulfurisphaera tokodaii str. 7]]
[[Category: Kawarabayasi Y]]
[[Category: Miyazono K]]
[[Category: Tanokura M]]
[[Category: Tsujimura M]]