3ccg: Difference between revisions

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New page: left|200px<br /><applet load="3ccg" size="350" color="white" frame="true" align="right" spinBox="true" caption="3ccg, resolution 1.500Å" /> '''Crystal structure o...
 
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[[Image:3ccg.jpg|left|200px]]<br /><applet load="3ccg" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3ccg, resolution 1.500&Aring;" />
'''Crystal structure of predicted HD superfamily hydrolase involved in NAD metabolism (NP_347894.1) from Clostridium acetobutylicum at 1.50 A resolution'''<br />


==About this Structure==
==Crystal structure of predicted HD superfamily hydrolase involved in NAD metabolism (NP_347894.1) from Clostridium acetobutylicum at 1.50 A resolution==
3CCG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_acetobutylicum_atcc_824 Clostridium acetobutylicum atcc 824] with <scene name='pdbligand=FE:'>FE</scene> and <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Fe+Binding+Site+For+Residue+A+190'>AC1</scene>, <scene name='pdbsite=AC2:Fe+Binding+Site+For+Residue+A+191'>AC2</scene> and <scene name='pdbsite=AC3:Po4+Binding+Site+For+Residue+A+192'>AC3</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CCG OCA].
<StructureSection load='3ccg' size='340' side='right'caption='[[3ccg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
[[Category: Clostridium acetobutylicum atcc 824]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3ccg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum_ATCC_824 Clostridium acetobutylicum ATCC 824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CCG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CCG FirstGlance]. <br>
[[Category: JCSG, Joint Center for Structural Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
[[Category: FE]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: PO4]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ccg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ccg OCA], [https://pdbe.org/3ccg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ccg RCSB], [https://www.ebi.ac.uk/pdbsum/3ccg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ccg ProSAT], [https://www.topsan.org/Proteins/JCSG/3ccg TOPSAN]</span></td></tr>
[[Category: hd domain]]
</table>
[[Category: jcsg]]
== Function ==
[[Category: joint center for structural genomic]]
[https://www.uniprot.org/uniprot/Q97JL1_CLOAB Q97JL1_CLOAB]  
[[Category: np_347894 1]]
== Evolutionary Conservation ==
[[Category: predicted hd superfamily hydrolase involved in nad metabolism]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: protein structure initiative]]
Check<jmol>
[[Category: psi-2]]
  <jmolCheckbox>
[[Category: structural genomic]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cc/3ccg_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Mar 14 09:41:03 2008''
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ccg ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Clostridium acetobutylicum ATCC 824]]
[[Category: Large Structures]]
Retrieved from "https://proteopedia.org/3ccg"