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==Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form==
==Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form==
<StructureSection load='3wkw' size='340' side='right' caption='[[3wkw]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='3wkw' size='340' side='right'caption='[[3wkw]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3wkw]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WKW OCA]. <br>
<table><tr><td colspan='2'>[[3wkw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifidobacterium_longum_subsp._longum_JCM_1217 Bifidobacterium longum subsp. longum JCM 1217]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WKW FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wkx|3wkx]]</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wkw OCA], [https://pdbe.org/3wkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wkw RCSB], [https://www.ebi.ac.uk/pdbsum/3wkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wkw ProSAT]</span></td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wkw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wkw RCSB], [http://www.ebi.ac.uk/pdbsum/3wkw PDBsum]</span></td></tr>
</table>
<table>
== Function ==
[https://www.uniprot.org/uniprot/HYBA1_BIFL2 HYBA1_BIFL2] Beta-L-arabinofuranosidase that removes the beta-L-arabinofuranose residue from the non-reducing end of various substrates, including beta-L-arabinofuranosyl-hydroxyproline (Ara-Hyp), Ara-beta-1,2-Ara-beta-Hyp (Ara(2)-Hyp), Ara-beta-1,2-Ara-beta-1,2-Ara-beta-Hyp (Ara(3)-Hyp), and beta-L-arabinofuranosyl-(1->2)-1-O-methyl-beta-L-arabinofuranose. In the presence of 1-alkanols, shows transglycosylation activity, retaining the anomeric configuration of the arabinofuranose residue.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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Crystal structure of glycoside hydrolase family 127 beta-l-arabinofuranosidase from Bifidobacterium longum.,Ito T, Saikawa K, Kim S, Fujita K, Ishiwata A, Kaeothip S, Arakawa T, Wakagi T, Beckham GT, Ito Y, Fushinobu S Biochem Biophys Res Commun. 2014 Apr 25;447(1):32-7. doi:, 10.1016/j.bbrc.2014.03.096. Epub 2014 Mar 27. PMID:24680821<ref>PMID:24680821</ref>
Crystal structure of glycoside hydrolase family 127 beta-l-arabinofuranosidase from Bifidobacterium longum.,Ito T, Saikawa K, Kim S, Fujita K, Ishiwata A, Kaeothip S, Arakawa T, Wakagi T, Beckham GT, Ito Y, Fushinobu S Biochem Biophys Res Commun. 2014 Apr 25;447(1):32-7. doi:, 10.1016/j.bbrc.2014.03.096. Epub 2014 Mar 27. PMID:24680821<ref>PMID:24680821</ref>


From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>== References ==
</div>
<div class="pdbe-citations 3wkw" style="background-color:#fffaf0;"></div>
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Non-reducing end beta-L-arabinofuranosidase]]
[[Category: Bifidobacterium longum subsp. longum JCM 1217]]
[[Category: Arakawa, T.]]
[[Category: Large Structures]]
[[Category: Fujita, K.]]
[[Category: Arakawa T]]
[[Category: Ito, T.]]
[[Category: Fujita K]]
[[Category: Saikawa, K.]]
[[Category: Ito T]]
[[Category: Wakagi, T.]]
[[Category: Saikawa K]]
[[Category: Hydrolase]]
[[Category: Wakagi T]]
[[Category: Intracellular]]
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