3amo: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Time-resolved X-ray Crystal Structure Analysis of Enzymatic Reaction of Copper Amine Oxidase from Arthrobacter globiformis==
==Time-resolved X-ray Crystal Structure Analysis of Enzymatic Reaction of Copper Amine Oxidase from Arthrobacter globiformis==
<StructureSection load='3amo' size='340' side='right' caption='[[3amo]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3amo' size='340' side='right'caption='[[3amo]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3amo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AMO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AMO FirstGlance]. <br>
<table><tr><td colspan='2'>[[3amo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AMO FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=1TY:3-{(3E)-4-HYDROXY-6-OXO-3-[(2-PHENYLETHYL)IMINO]CYCLOHEXA-1,4-DIEN-1-YL}ALANINE'>1TY</scene>, <scene name='pdbligand=2TY:2-HYDROXY-5-{[(1E)-2-PHENYLETHYLIDENE]AMINO}-L-TYROSINE'>2TY</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1TY:3-{(3E)-4-HYDROXY-6-OXO-3-[(2-PHENYLETHYL)IMINO]CYCLOHEXA-1,4-DIEN-1-YL}ALANINE'>1TY</scene>, <scene name='pdbligand=2TY:2-HYDROXY-5-{[(1E)-2-PHENYLETHYLIDENE]AMINO}-L-TYROSINE'>2TY</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1av4|1av4]], [[2cfd|2cfd]], [[1iu7|1iu7]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3amo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3amo OCA], [https://pdbe.org/3amo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3amo RCSB], [https://www.ebi.ac.uk/pdbsum/3amo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3amo ProSAT]</span></td></tr>
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>
</table>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3amo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3amo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3amo RCSB], [http://www.ebi.ac.uk/pdbsum/3amo PDBsum]</span></td></tr>
== Function ==
<table>
[https://www.uniprot.org/uniprot/PAOX_ARTGO PAOX_ARTGO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 16:
Detection of the reaction intermediates catalyzed by a copper amine oxidase.,Kataoka M, Oya H, Tominaga A, Otsu M, Okajima T, Tanizawa K, Yamaguchi H J Synchrotron Radiat. 2011 Jan;18(1):58-61. Epub 2010 Nov 5. PMID:21169693<ref>PMID:21169693</ref>
Detection of the reaction intermediates catalyzed by a copper amine oxidase.,Kataoka M, Oya H, Tominaga A, Otsu M, Okajima T, Tanizawa K, Yamaguchi H J Synchrotron Radiat. 2011 Jan;18(1):58-61. Epub 2010 Nov 5. PMID:21169693<ref>PMID:21169693</ref>


From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 3amo" style="background-color:#fffaf0;"></div>
==See Also==
*[[Copper amine oxidase 3D structures|Copper amine oxidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 22: Line 27:
</StructureSection>
</StructureSection>
[[Category: Arthrobacter globiformis]]
[[Category: Arthrobacter globiformis]]
[[Category: Primary-amine oxidase]]
[[Category: Large Structures]]
[[Category: Kataoka, M.]]
[[Category: Kataoka M]]
[[Category: Okajima, T.]]
[[Category: Okajima T]]
[[Category: Otsu, M.]]
[[Category: Otsu M]]
[[Category: Oya, H.]]
[[Category: Oya H]]
[[Category: Tanizawa, K.]]
[[Category: Tanizawa K]]
[[Category: Tominaga, A.]]
[[Category: Tominaga A]]
[[Category: Yamaguchi, H.]]
[[Category: Yamaguchi H]]
[[Category: Amine oxidase]]
[[Category: Oxidoreductase]]
[[Category: Phenylethylamine]]
[[Category: Product schiff-base]]
[[Category: Reaction intermediate]]
[[Category: Substrate schiff-base]]
[[Category: Topaquinone]]
[[Category: Tpq]]
[[Category: Tpq biogenesis]]
Retrieved from "https://proteopedia.org/3amo"