3efz: Difference between revisions
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==Crystal Structure of a 14-3-3 protein from cryptosporidium parvum (cgd1_2980)== | ==Crystal Structure of a 14-3-3 protein from cryptosporidium parvum (cgd1_2980)== | ||
<StructureSection load='3efz' size='340' side='right' caption='[[3efz]], [[Resolution|resolution]] 2.08Å' scene=''> | <StructureSection load='3efz' size='340' side='right'caption='[[3efz]], [[Resolution|resolution]] 2.08Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3efz]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3efz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Crypi Crypi]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ijp 2ijp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EFZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EFZ FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>< | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ijp|2ijp]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2ijp|2ijp]]</div></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cgd1_2980 ([ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cgd1_2980 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353152 CRYPI])</td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3efz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3efz OCA], [https://pdbe.org/3efz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3efz RCSB], [https://www.ebi.ac.uk/pdbsum/3efz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3efz ProSAT]</span></td></tr> | ||
<table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ef/3efz_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ef/3efz_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3efz ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 25: | Line 26: | ||
Characterization of 14-3-3 proteins from Cryptosporidium parvum.,Brokx SJ, Wernimont AK, Dong A, Wasney GA, Lin YH, Lew J, Vedadi M, Lee WH, Hui R PLoS One. 2011;6(8):e14827. Epub 2011 Aug 11. PMID:21853016<ref>PMID:21853016</ref> | Characterization of 14-3-3 proteins from Cryptosporidium parvum.,Brokx SJ, Wernimont AK, Dong A, Wasney GA, Lin YH, Lew J, Vedadi M, Lee WH, Hui R PLoS One. 2011;6(8):e14827. Epub 2011 Aug 11. PMID:21853016<ref>PMID:21853016</ref> | ||
From | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 3efz" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[14-3-3 protein 3D structures|14-3-3 protein 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Crypi]] | ||
[[Category: Alam, Z | [[Category: Large Structures]] | ||
[[Category: Arrowsmith, C H | [[Category: Alam, Z]] | ||
[[Category: Bochkarev, A | [[Category: Arrowsmith, C H]] | ||
[[Category: Brokx, S | [[Category: Bochkarev, A]] | ||
[[Category: Dong, A | [[Category: Brokx, S]] | ||
[[Category: Edwards, A M | [[Category: Dong, A]] | ||
[[Category: Hui, R | [[Category: Edwards, A M]] | ||
[[Category: Kozieradzki, I | [[Category: Hui, R]] | ||
[[Category: Lew, J | [[Category: Kozieradzki, I]] | ||
[[Category: Lin, Y H | [[Category: Lew, J]] | ||
[[Category: Qiu, W | [[Category: Lin, Y H]] | ||
[[Category: Ren, H | [[Category: Qiu, W]] | ||
[[Category: | [[Category: Ren, H]] | ||
[[Category: Sundstrom, M | [[Category: Structural genomic]] | ||
[[Category: Vedadi, M | [[Category: Sundstrom, M]] | ||
[[Category: Wasney, G A | [[Category: Vedadi, M]] | ||
[[Category: Weigelt, J | [[Category: Wasney, G A]] | ||
[[Category: Wernimont, A K | [[Category: Weigelt, J]] | ||
[[Category: Zhao, Y | [[Category: Wernimont, A K]] | ||
[[Category: Zhao, Y]] | |||
[[Category: 14-3-3]] | [[Category: 14-3-3]] | ||
[[Category: Cell regulation]] | [[Category: Cell regulation]] | ||
[[Category: Sgc]] | [[Category: Sgc]] | ||
[[Category: Signaling protein]] | [[Category: Signaling protein]] | ||
