1dfx: Difference between revisions

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[[Image:1dfx.jpg|left|200px]]


{{Structure
==DESULFOFERRODOXIN FROM DESULFOVIBRIO DESULFURICANS, ATCC 27774==
|PDB= 1dfx |SIZE=350|CAPTION= <scene name='initialview01'>1dfx</scene>, resolution 1.9&Aring;
<StructureSection load='1dfx' size='340' side='right'caption='[[1dfx]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene> and <scene name='pdbligand=CA:CALCIUM ION'>CA</scene>
<table><tr><td colspan='2'>[[1dfx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_desulfuricans Desulfovibrio desulfuricans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DFX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DFX FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dfx OCA], [https://pdbe.org/1dfx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dfx RCSB], [https://www.ebi.ac.uk/pdbsum/1dfx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dfx ProSAT]</span></td></tr>
 
</table>
'''DESULFOFERRODOXIN FROM DESULFOVIBRIO DESULFURICANS, ATCC 27774'''
== Function ==
 
[https://www.uniprot.org/uniprot/DFX_DESDA DFX_DESDA] Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity (By similarity).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1DFX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_desulfuricans Desulfovibrio desulfuricans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DFX OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/1dfx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dfx ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Desulfovibrio desulfuricans]]
[[Category: Desulfovibrio desulfuricans]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Carrondo, M A.]]
[[Category: Carrondo MA]]
[[Category: Coelho, A V.]]
[[Category: Coelho AV]]
[[Category: Matias, P M.]]
[[Category: Matias PM]]
[[Category: CA]]
[[Category: FE]]
[[Category: electron transport]]
[[Category: non-heme iron protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 10:37:58 2008''
Retrieved from "https://proteopedia.org/1dfx"