3djc: Difference between revisions
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==CRYSTAL STRUCTURE OF PANTOTHENATE KINASE FROM LEGIONELLA PNEUMOPHILA== | ==CRYSTAL STRUCTURE OF PANTOTHENATE KINASE FROM LEGIONELLA PNEUMOPHILA== | ||
<StructureSection load='3djc' size='340' side='right' caption='[[3djc]], [[Resolution|resolution]] 2.40Å' scene=''> | <StructureSection load='3djc' size='340' side='right'caption='[[3djc]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3djc]] is a 12 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3djc]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DJC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DJC FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |||
<tr><td class="sblockLbl"><b> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3djc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3djc OCA], [https://pdbe.org/3djc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3djc RCSB], [https://www.ebi.ac.uk/pdbsum/3djc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3djc ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3djc TOPSAN]</span></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | </table> | ||
<table> | == Function == | ||
[https://www.uniprot.org/uniprot/COAX_LEGPH COAX_LEGPH] Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis (By similarity). | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/3djc_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/3djc_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3djc ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Pantothenate kinase|Pantothenate kinase]] | *[[Pantothenate kinase 3D structures|Pantothenate kinase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Legionella pneumophila subsp. pneumophila str. | [[Category: Large Structures]] | ||
[[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]] | |||
[[Category: Almo | [[Category: Almo SC]] | ||
[[Category: Bonanno | [[Category: Bonanno JB]] | ||
[[Category: Burley | [[Category: Burley SK]] | ||
[[Category: Dickey | [[Category: Dickey M]] | ||
[[Category: Koss | [[Category: Koss J]] | ||
[[Category: Logan | [[Category: Logan C]] | ||
[[Category: Maletic | [[Category: Maletic M]] | ||
[[Category: Patskovsky Y]] | |||
[[Category: Patskovsky | [[Category: Romero R]] | ||
[[Category: Romero | [[Category: Sauder JM]] | ||
[[Category: Sauder | [[Category: Wasserman S]] | ||
[[Category: Wasserman | |||
Latest revision as of 09:41, 21 February 2024
CRYSTAL STRUCTURE OF PANTOTHENATE KINASE FROM LEGIONELLA PNEUMOPHILA
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