2j9u: Difference between revisions

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[[Image:2j9u.gif|left|200px]]<br />
<applet load="2j9u" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2j9u, resolution 2.00&Aring;" />
'''2 ANGSTROM X-RAY STRUCTURE OF THE YEAST ESCRT-I VPS28 C-TERMINUS IN COMPLEX WITH THE NZF-N DOMAIN FROM ESCRT-II'''<br />


==About this Structure==
==2 Angstrom X-ray structure of the yeast ESCRT-I Vps28 C-terminus in complex with the NZF-N domain from ESCRT-II==
2J9U is a [[http://en.wikipedia.org/wiki/Protein_complex Protein complex]] structure of sequences from [[http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]] with ZN as [[http://en.wikipedia.org/wiki/ligand ligand]]. Structure known Active Site: AC1. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2J9U OCA]].
<StructureSection load='2j9u' size='340' side='right'caption='[[2j9u]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
[[Category: Protein complex]]
== Structural highlights ==
<table><tr><td colspan='2'>[[2j9u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J9U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J9U FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j9u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j9u OCA], [https://pdbe.org/2j9u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j9u RCSB], [https://www.ebi.ac.uk/pdbsum/2j9u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j9u ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/VPS28_YEAST VPS28_YEAST] Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Required for normal endocytic and biosynthetic traffic to the yeast vacuole.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/2j9u_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j9u ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Vacuolar protein sorting-associated protein 3D structures|Vacuolar protein sorting-associated protein 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Emr, S.D.]]
[[Category: Emr SD]]
[[Category: Gill, D.J.]]
[[Category: Gill DJ]]
[[Category: Perisic, O.]]
[[Category: Perisic O]]
[[Category: Sun, J.]]
[[Category: Sun J]]
[[Category: Teo, H.L.]]
[[Category: Teo HL]]
[[Category: Veprintsev, D.B.]]
[[Category: Veprintsev DB]]
[[Category: Williams, R.L.]]
[[Category: Williams RL]]
[[Category: ZN]]
[[Category: chmp]]
[[Category: escrt]]
[[Category: hiv budding]]
[[Category: membrane]]
[[Category: metal-binding]]
[[Category: mvb]]
[[Category: nzf finger]]
[[Category: protein transport]]
[[Category: transport]]
[[Category: vps]]
[[Category: vps28]]
[[Category: vps36]]
[[Category: zinc]]
[[Category: zinc-finger]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Oct 30 17:28:02 2007''
Retrieved from "https://proteopedia.org/2j9u"