1z1e: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Crystal structure of stilbene synthase from Arachis hypogaea==
==Crystal structure of stilbene synthase from Arachis hypogaea==
<StructureSection load='1z1e' size='340' side='right' caption='[[1z1e]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='1z1e' size='340' side='right'caption='[[1z1e]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1z1e]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1E FirstGlance]. <br>
<table><tr><td colspan='2'>[[1z1e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1E FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene><br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1z1f|1z1f]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trihydroxystilbene_synthase Trihydroxystilbene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.95 2.3.1.95] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1e OCA], [https://pdbe.org/1z1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1e RCSB], [https://www.ebi.ac.uk/pdbsum/1z1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1e ProSAT]</span></td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z1e RCSB], [http://www.ebi.ac.uk/pdbsum/1z1e PDBsum]</span></td></tr>
</table>
<table>
== Function ==
[https://www.uniprot.org/uniprot/Q9SLV5_ARAHY Q9SLV5_ARAHY]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1e_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1e_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z1e ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arachis hypogaea]]
[[Category: Arachis hypogaea]]
[[Category: Trihydroxystilbene synthase]]
[[Category: Large Structures]]
[[Category: Kita, A.]]
[[Category: Kita A]]
[[Category: Miki, K.]]
[[Category: Miki K]]
[[Category: Sankawa, U.]]
[[Category: Sankawa U]]
[[Category: Shomura, Y.]]
[[Category: Shomura Y]]
[[Category: Suh, D Y.]]
[[Category: Suh DY]]
[[Category: Torayama, I.]]
[[Category: Torayama I]]
[[Category: Xiang, T.]]
[[Category: Xiang T]]
[[Category: Stilbene]]
[[Category: St]]
[[Category: Transferase]]
[[Category: Type iii polyketide synthase]]

Latest revision as of 13:38, 13 March 2024

Crystal structure of stilbene synthase from Arachis hypogaea

1z1e, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA