1y9b: Difference between revisions
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==Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961== | ==Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961== | ||
<StructureSection load='1y9b' size='340' side='right' caption='[[1y9b]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='1y9b' size='340' side='right'caption='[[1y9b]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1y9b]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1y9b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y9B FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | ||
<tr><td class="sblockLbl"><b>[[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9b OCA], [https://pdbe.org/1y9b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y9b RCSB], [https://www.ebi.ac.uk/pdbsum/1y9b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y9b ProSAT], [https://www.topsan.org/Proteins/MCSG/1y9b TOPSAN]</span></td></tr> | ||
<table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9b_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9b_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y9b ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Vibrio cholerae | [[Category: Large Structures]] | ||
[[Category: Binkowski | [[Category: Vibrio cholerae O1 biovar El Tor str. N16961]] | ||
[[Category: Hatzos | [[Category: Binkowski TA]] | ||
[[Category: Joachimiak | [[Category: Hatzos C]] | ||
[[Category: Joachimiak A]] | |||
[[Category: Moy | [[Category: Moy S]] | ||
[[Category: Quartey | [[Category: Quartey P]] | ||
Latest revision as of 00:41, 21 November 2024
Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961
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