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==ATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE==
==ATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE==
<StructureSection load='2btv' size='340' side='right' caption='[[2btv]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
<SX load='2btv' size='340' side='right' viewer='molstar' caption='[[2btv]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2btv]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Viruses Viruses]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BTV FirstGlance]. <br>
<table><tr><td colspan='2'>[[2btv]] is a 15 chain structure with sequence from [https://en.wikipedia.org/wiki/Bluetongue_virus_(serotype_1_/_isolate_South_Africa) Bluetongue virus (serotype 1 / isolate South Africa)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BTV FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2btv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2btv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2btv RCSB], [http://www.ebi.ac.uk/pdbsum/2btv PDBsum]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
<table>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2btv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2btv OCA], [https://pdbe.org/2btv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2btv RCSB], [https://www.ebi.ac.uk/pdbsum/2btv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2btv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/VP3_BTV1S VP3_BTV1S] The VP3 protein is one of the five proteins (with VP1, VP4, VP6 and VP7) which form the inner capsid of the virus.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bt/2btv_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bt/2btv_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2btv ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The structure of the core particle of bluetongue virus has been determined by X-ray crystallography at a resolution approaching 3.5 A. This transcriptionally active compartment, 700 A in diameter, represents the largest molecular structure determined in such detail. The atomic structure indicates how approximately 1,000 protein components self-assemble, using both the classical mechanism of quasi-equivalent contacts, which are achieved through triangulation, and a different method, which we term geometrical quasi-equivalence.
The atomic structure of the bluetongue virus core.,Grimes JM, Burroughs JN, Gouet P, Diprose JM, Malby R, Zientara S, Mertens PP, Stuart DI Nature. 1998 Oct 1;395(6701):470-8. PMID:9774103<ref>PMID:9774103</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
==See Also==
</div>
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</SX>
[[Category: Viruses]]
[[Category: Large Structures]]
[[Category: Burroughs, J N.]]
[[Category: Burroughs JN]]
[[Category: Diprose, J M.]]
[[Category: Diprose JM]]
[[Category: Gouet, P.]]
[[Category: Gouet P]]
[[Category: Grimes, J M.]]
[[Category: Grimes JM]]
[[Category: Malby, R.]]
[[Category: Malby R]]
[[Category: Mertens, P P.C.]]
[[Category: Mertens PPC]]
[[Category: Stuart, D I.]]
[[Category: Stuart DI]]
[[Category: Zientras, S.]]
[[Category: Zientras S]]
[[Category: Icosahedral virus]]
[[Category: Virus]]
[[Category: Virus/viral protein]]

Latest revision as of 09:17, 14 February 2024

ATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE

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