2hep: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Solution NMR structure of the UPF0291 protein ynzC from Bacillus subtilis. Northeast Structural Genomics target SR384.==
==Solution NMR structure of the UPF0291 protein ynzC from Bacillus subtilis. Northeast Structural Genomics target SR384.==
<StructureSection load='2hep' size='340' side='right' caption='[[2hep]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2hep' size='340' side='right'caption='[[2hep]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2hep]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HEP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HEP FirstGlance]. <br>
<table><tr><td colspan='2'>[[2hep]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HEP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HEP FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ynzC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hep FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hep OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2hep RCSB], [http://www.ebi.ac.uk/pdbsum/2hep PDBsum], [http://www.topsan.org/Proteins/NESGC/2hep TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hep FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hep OCA], [https://pdbe.org/2hep PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hep RCSB], [https://www.ebi.ac.uk/pdbsum/2hep PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hep ProSAT], [https://www.topsan.org/Proteins/NESGC/2hep TOPSAN]</span></td></tr>
<table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YNZC_BACSU YNZC_BACSU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/he/2hep_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/he/2hep_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hep ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Acton, T B.]]
[[Category: Large Structures]]
[[Category: Aramini, J M.]]
[[Category: Acton TB]]
[[Category: Baran, M.]]
[[Category: Aramini JM]]
[[Category: Cunningham, K.]]
[[Category: Baran M]]
[[Category: Ho, C K.]]
[[Category: Cunningham K]]
[[Category: Liu, J.]]
[[Category: Ho CK]]
[[Category: Ma, L C.]]
[[Category: Liu J]]
[[Category: Montelione, G T.]]
[[Category: Ma L-C]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Montelione GT]]
[[Category: Rost, B.]]
[[Category: Rost B]]
[[Category: Shetty, K.]]
[[Category: Shetty K]]
[[Category: Swapna, G V.T.]]
[[Category: Swapna GVT]]
[[Category: Xiao, R.]]
[[Category: Xiao R]]
[[Category: Autostructure]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: Protein structure initiative]]
[[Category: Psi-1]]
[[Category: Sr384]]
[[Category: Structural genomic]]
[[Category: Unknown function]]

Latest revision as of 19:01, 29 May 2024

Solution NMR structure of the UPF0291 protein ynzC from Bacillus subtilis. Northeast Structural Genomics target SR384.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA