3bu2: Difference between revisions
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==Crystal structure of a tRNA-binding protein from Staphylococcus saprophyticus subsp. saprophyticus. Northeast Structural Genomics Consortium target SyR77== | ==Crystal structure of a tRNA-binding protein from Staphylococcus saprophyticus subsp. saprophyticus. Northeast Structural Genomics Consortium target SyR77== | ||
<StructureSection load='3bu2' size='340' side='right' caption='[[3bu2]], [[Resolution|resolution]] 2.70Å' scene=''> | <StructureSection load='3bu2' size='340' side='right'caption='[[3bu2]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3bu2]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3bu2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Stas1 Stas1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BU2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BU2 FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SSP1021 ([ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SSP1021 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=342451 STAS1])</td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bu2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bu2 OCA], [https://pdbe.org/3bu2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bu2 RCSB], [https://www.ebi.ac.uk/pdbsum/3bu2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bu2 ProSAT], [https://www.topsan.org/Proteins/NESGC/3bu2 TOPSAN]</span></td></tr> | ||
<table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bu/3bu2_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bu/3bu2_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bu2 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Acton, T B | [[Category: Stas1]] | ||
[[Category: Baran, M C | [[Category: Acton, T B]] | ||
[[Category: Cunningham, K | [[Category: Baran, M C]] | ||
[[Category: Fang, Y | [[Category: Cunningham, K]] | ||
[[Category: Forouhar, F | [[Category: Fang, Y]] | ||
[[Category: Hunt, J F | [[Category: Forouhar, F]] | ||
[[Category: Liu, J | [[Category: Hunt, J F]] | ||
[[Category: Ma, L | [[Category: Liu, J]] | ||
[[Category: Montelione, G T | [[Category: Ma, L C]] | ||
[[Category: | [[Category: Montelione, G T]] | ||
[[Category: Rost, B | [[Category: Structural genomic]] | ||
[[Category: Seetharaman, J | [[Category: Rost, B]] | ||
[[Category: Su, M | [[Category: Seetharaman, J]] | ||
[[Category: Tong, L | [[Category: Su, M]] | ||
[[Category: Wang, D | [[Category: Tong, L]] | ||
[[Category: Xia, R | [[Category: Wang, D]] | ||
[[Category: Xia, R]] | |||
[[Category: Nesg]] | [[Category: Nesg]] | ||
[[Category: | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Rna binding protein]] | [[Category: Rna binding protein]] | ||
[[Category: Rna-binding]] | [[Category: Rna-binding]] | ||
[[Category: Trna-binding]] | [[Category: Trna-binding]] | ||
