2k3i: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Solution NMR structure of protein yiiS from Shigella flexneri. Northeast Structural Genomics Consortium target SfR90==
==Solution NMR structure of protein yiiS from Shigella flexneri. Northeast Structural Genomics Consortium target SfR90==
<StructureSection load='2k3i' size='340' side='right' caption='[[2k3i]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2k3i' size='340' side='right'caption='[[2k3i]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2k3i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K3I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K3I FirstGlance]. <br>
<table><tr><td colspan='2'>[[2k3i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a Shigella flexneri 2a]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K3I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K3I FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yiiS, S3747, SF4000 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k3i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k3i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k3i RCSB], [http://www.ebi.ac.uk/pdbsum/2k3i PDBsum], [http://www.topsan.org/Proteins/NESGC/2k3i TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k3i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k3i OCA], [https://pdbe.org/2k3i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k3i RCSB], [https://www.ebi.ac.uk/pdbsum/2k3i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k3i ProSAT], [https://www.topsan.org/Proteins/NESGC/2k3i TOPSAN]</span></td></tr>
<table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A384LB29_SHIFL A0A384LB29_SHIFL]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/2k3i_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/2k3i_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k3i ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Shigella paradysenteriae weldin 1927]]
[[Category: Large Structures]]
[[Category: Acton, T.]]
[[Category: Shigella flexneri 2a]]
[[Category: Baran, M C.]]
[[Category: Acton T]]
[[Category: Ciccosanti, C.]]
[[Category: Baran MC]]
[[Category: Eletsky, A.]]
[[Category: Ciccosanti C]]
[[Category: Jiang, M.]]
[[Category: Eletsky A]]
[[Category: Liu, J.]]
[[Category: Jiang M]]
[[Category: Mills, J L.]]
[[Category: Liu J]]
[[Category: Montelione, G T.]]
[[Category: Mills JL]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Montelione GT]]
[[Category: Rost, B.]]
[[Category: Rost B]]
[[Category: Singarapu, K K.]]
[[Category: Singarapu KK]]
[[Category: Sukumaran, D K.]]
[[Category: Sukumaran DK]]
[[Category: Swapna, G V.T.]]
[[Category: Swapna GVT]]
[[Category: Szyperski, T.]]
[[Category: Szyperski T]]
[[Category: Wang, D.]]
[[Category: Wang D]]
[[Category: Xiao, R.]]
[[Category: Xiao R]]
[[Category: Gft nmr]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: Protein structure]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/2k3i"