3cp3: Difference between revisions

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==Crystal structure of conserved protein of unknown function DIP1874 from Corynebacterium diphtheriae==
==Crystal structure of conserved protein of unknown function DIP1874 from Corynebacterium diphtheriae==
<StructureSection load='3cp3' size='340' side='right' caption='[[3cp3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3cp3' size='340' side='right'caption='[[3cp3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3cp3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Corynebacterium_diphtheriae_nctc_13129 Corynebacterium diphtheriae nctc 13129]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CP3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CP3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3cp3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae_NCTC_13129 Corynebacterium diphtheriae NCTC 13129]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CP3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CP3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DIP1874 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257309 Corynebacterium diphtheriae NCTC 13129])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cp3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cp3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cp3 RCSB], [http://www.ebi.ac.uk/pdbsum/3cp3 PDBsum], [http://www.topsan.org/Proteins/MCSG/3cp3 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cp3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cp3 OCA], [https://pdbe.org/3cp3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cp3 RCSB], [https://www.ebi.ac.uk/pdbsum/3cp3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cp3 ProSAT], [https://www.topsan.org/Proteins/MCSG/3cp3 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q6NFL3_CORDI Q6NFL3_CORDI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cp/3cp3_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cp/3cp3_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cp3 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Corynebacterium diphtheriae nctc 13129]]
[[Category: Corynebacterium diphtheriae NCTC 13129]]
[[Category: Clancy, S.]]
[[Category: Large Structures]]
[[Category: Joachimiak, A.]]
[[Category: Clancy S]]
[[Category: Kim, Y.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Kim Y]]
[[Category: Wu, R.]]
[[Category: Wu R]]
[[Category: Alpha-beta fold]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]

Latest revision as of 09:37, 21 February 2024

Crystal structure of conserved protein of unknown function DIP1874 from Corynebacterium diphtheriae

3cp3, resolution 2.00Å

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