3g6s: Difference between revisions
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==Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D== | ==Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D== | ||
<StructureSection load='3g6s' size='340' side='right' caption='[[3g6s]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='3g6s' size='340' side='right'caption='[[3g6s]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3g6s]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3g6s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phocaeicola_vulgatus_ATCC_8482 Phocaeicola vulgatus ATCC 8482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G6S FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g6s OCA], [https://pdbe.org/3g6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g6s RCSB], [https://www.ebi.ac.uk/pdbsum/3g6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g6s ProSAT], [https://www.topsan.org/Proteins/NESGC/3g6s TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/A6KY15_PHOV8 A6KY15_PHOV8] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/3g6s_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/3g6s_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g6s ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Acton | [[Category: Phocaeicola vulgatus ATCC 8482]] | ||
[[Category: Ciccosanti | [[Category: Acton TB]] | ||
[[Category: Everett | [[Category: Ciccosanti C]] | ||
[[Category: Foote | [[Category: Everett JK]] | ||
[[Category: Forouhar | [[Category: Foote EL]] | ||
[[Category: Hunt | [[Category: Forouhar F]] | ||
[[Category: Lew | [[Category: Hunt JF]] | ||
[[Category: Montelione | [[Category: Lew S]] | ||
[[Category: Montelione GT]] | |||
[[Category: Nair | [[Category: Nair R]] | ||
[[Category: Rost | [[Category: Rost B]] | ||
[[Category: Sahdev | [[Category: Sahdev S]] | ||
[[Category: Seetharaman | [[Category: Seetharaman J]] | ||
[[Category: Tong | [[Category: Tong L]] | ||
[[Category: Wang | [[Category: Wang D]] | ||
[[Category: Xiao | [[Category: Xiao R]] | ||
Latest revision as of 09:10, 30 October 2024
Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D
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