3gmi: Difference between revisions
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==Crystal structure of a protein of unknown function from Methanocaldococcus jannaschii== | ==Crystal structure of a protein of unknown function from Methanocaldococcus jannaschii== | ||
<StructureSection load='3gmi' size='340' side='right' caption='[[3gmi]], [[Resolution|resolution]] 1.91Å' scene=''> | <StructureSection load='3gmi' size='340' side='right'caption='[[3gmi]], [[Resolution|resolution]] 1.91Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3gmi]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3gmi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GMI FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gmi OCA], [https://pdbe.org/3gmi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gmi RCSB], [https://www.ebi.ac.uk/pdbsum/3gmi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gmi ProSAT], [https://www.topsan.org/Proteins/MCSG/3gmi TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 11: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gmi_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gmi_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gmi ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Methanocaldococcus jannaschii]] | [[Category: Large Structures]] | ||
[[Category: Freeman | [[Category: Methanocaldococcus jannaschii DSM 2661]] | ||
[[Category: Hatzos | [[Category: Freeman L]] | ||
[[Category: Joachimiak | [[Category: Hatzos C]] | ||
[[Category: Joachimiak A]] | |||
[[Category: Zhang | [[Category: Zhang R]] | ||
Latest revision as of 01:51, 21 November 2024
Crystal structure of a protein of unknown function from Methanocaldococcus jannaschii
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