1p1m: Difference between revisions

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[[Image:1p1m.gif|left|200px]]


{{Structure
==Structure of Thermotoga maritima amidohydrolase TM0936 bound to Ni and methionine==
|PDB= 1p1m |SIZE=350|CAPTION= <scene name='initialview01'>1p1m</scene>, resolution 1.50&Aring;
<StructureSection load='1p1m' size='340' side='right'caption='[[1p1m]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene> and <scene name='pdbligand=MET:METHIONINE'>MET</scene>
<table><tr><td colspan='2'>[[1p1m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P1M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P1M FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
|GENE= TM0936 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MET:METHIONINE'>MET</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p1m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p1m OCA], [https://pdbe.org/1p1m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p1m RCSB], [https://www.ebi.ac.uk/pdbsum/1p1m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p1m ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1p1m TOPSAN]</span></td></tr>
 
</table>
'''Structure of Thermotoga maritima amidohydrolase TM0936 bound to Ni and methionine'''
== Function ==
 
[https://www.uniprot.org/uniprot/MTAD_THEMA MTAD_THEMA] Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Adenosine-5-monophosphate (AMP) and S-adenosyl-L-methionine (SAM) are not enzyme substrates.<ref>PMID:17603473</ref>
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1P1M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P1M OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/1p1m_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1p1m ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Buglino, J A.]]
[[Category: Buglino JA]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Kniewel, R.]]
[[Category: Kniewel R]]
[[Category: Lima, C D.]]
[[Category: Lima CD]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: MET]]
[[Category: NI]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: putative metal dependent hydrolase]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:18:35 2008''
Retrieved from "https://proteopedia.org/1p1m"